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Cluster: HRGMv2_2488_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2488_2 HRGMv2_2488_2_74 66658 67716 - GH170
pfam HRGMv2_2488_2 HRGMv2_2488_2_75 68151 69164 + tRNA-synt_2 | AsnA
TC HRGMv2_2488_2 HRGMv2_2488_2_76 69229 70620 - 2.A.3.8.9
peptidase HRGMv2_2488_2 HRGMv2_2488_2_77 70633 71361 - C26.UPW
STP HRGMv2_2488_2 HRGMv2_2488_2_78 71471 72577 - ATPase_2
TC HRGMv2_2488_2 HRGMv2_2488_2_79 72739 74112 - 2.A.3.1.15
TC HRGMv2_2488_2 HRGMv2_2488_2_80 74185 75534 - 2.A.3.1.16
peptidase HRGMv2_2488_2 HRGMv2_2488_2_81 75698 76330 - S26.UPA
TC HRGMv2_2488_2 HRGMv2_2488_2_82 76444 78570 - 3.A.9.1.2
pfam HRGMv2_2488_2 HRGMv2_2488_2_83 78901 79791 - DUF915
STP HRGMv2_2488_2 HRGMv2_2488_2_84 79772 81079 - PTS_EIIC
TC HRGMv2_2488_2 HRGMv2_2488_2_85 81171 81875 + 3.A.1.122.14
Gene ID: HRGMv2_2488_2_74
Type: CAZyme
Location: 66658 - 67716 (-)
Gene ID: HRGMv2_2488_2_75
Type: pfam
Location: 68151 - 69164 (+)
Gene ID: HRGMv2_2488_2_76
Type: TC
Location: 69229 - 70620 (-)
Gene ID: HRGMv2_2488_2_77
Type: peptidase
Location: 70633 - 71361 (-)
Gene ID: HRGMv2_2488_2_78
Type: STP
Location: 71471 - 72577 (-)
Gene ID: HRGMv2_2488_2_79
Type: TC
Location: 72739 - 74112 (-)
Gene ID: HRGMv2_2488_2_80
Type: TC
Location: 74185 - 75534 (-)
Gene ID: HRGMv2_2488_2_81
Type: peptidase
Location: 75698 - 76330 (-)
Gene ID: HRGMv2_2488_2_82
Type: TC
Location: 76444 - 78570 (-)
Gene ID: HRGMv2_2488_2_83
Type: pfam
Location: 78901 - 79791 (-)
Gene ID: HRGMv2_2488_2_84
Type: STP
Location: 79772 - 81079 (-)
Gene ID: HRGMv2_2488_2_85
Type: TC
Location: 81171 - 81875 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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