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Cluster: HRGMv2_2488_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2488_2 HRGMv2_2488_2_33 27957 28814 - 3.A.1.1.27
TC HRGMv2_2488_2 HRGMv2_2488_2_34 28817 30175 - 3.A.1.1.27
TC HRGMv2_2488_2 HRGMv2_2488_2_35 30250 31476 - 3.A.1.1.27
TC HRGMv2_2488_2 HRGMv2_2488_2_36 31592 32698 - 3.A.1.1.20
pfam HRGMv2_2488_2 HRGMv2_2488_2_37 32720 33382 - Hydrolase | HAD_2
CAZyme HRGMv2_2488_2 HRGMv2_2488_2_38 33375 35639 - GH65
CAZyme HRGMv2_2488_2 HRGMv2_2488_2_39 35810 37531 - CBM34 | GH13_20
CAZyme HRGMv2_2488_2 HRGMv2_2488_2_40 37535 39196 - GH13_31
Gene ID: HRGMv2_2488_2_33
Type: TC
Location: 27957 - 28814 (-)
Gene ID: HRGMv2_2488_2_34
Type: TC
Location: 28817 - 30175 (-)
Gene ID: HRGMv2_2488_2_35
Type: TC
Location: 30250 - 31476 (-)
Gene ID: HRGMv2_2488_2_36
Type: TC
Location: 31592 - 32698 (-)
Gene ID: HRGMv2_2488_2_37
Type: pfam
Location: 32720 - 33382 (-)
Gene ID: HRGMv2_2488_2_38
Type: CAZyme
Location: 33375 - 35639 (-)
Gene ID: HRGMv2_2488_2_39
Type: CAZyme
Location: 35810 - 37531 (-)
Gene ID: HRGMv2_2488_2_40
Type: CAZyme
Location: 37535 - 39196 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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