Cluster: HRGMv2_2488_CGC25
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2488
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2488_19 | HRGMv2_2488_19_28 | 28968 | 30269 | - | 2.A.3.8.12 |
| CAZyme | HRGMv2_2488_19 | HRGMv2_2488_19_29 | 30378 | 31085 | + | GH25 |
| TC | HRGMv2_2488_19 | HRGMv2_2488_19_30 | 31088 | 32323 | + | 3.A.18.1.1 |
| TC | HRGMv2_2488_19 | HRGMv2_2488_19_31 | 32320 | 33648 | + | 4.A.3.2.4 |
Gene ID: HRGMv2_2488_19_28
Type: TC
Location: 28968 - 30269 (-)
Type: TC
Location: 28968 - 30269 (-)
Gene ID: HRGMv2_2488_19_29
Type: CAZyme
Location: 30378 - 31085 (+)
Type: CAZyme
Location: 30378 - 31085 (+)
Gene ID: HRGMv2_2488_19_30
Type: TC
Location: 31088 - 32323 (+)
Type: TC
Location: 31088 - 32323 (+)
Gene ID: HRGMv2_2488_19_31
Type: TC
Location: 32320 - 33648 (+)
Type: TC
Location: 32320 - 33648 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lactobacillus
Species
Lactobacillus crispatus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.