dbCAN Logo

Cluster: HRGMv2_2488_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2488_14 HRGMv2_2488_14_26 26974 28389 + 2.A.47.3.4
pfam HRGMv2_2488_14 HRGMv2_2488_14_27 28405 30189 + FAD_binding_2 | FMN_bind
TC HRGMv2_2488_14 HRGMv2_2488_14_28 30281 31393 - 3.A.1.1.20
CAZyme HRGMv2_2488_14 HRGMv2_2488_14_29 31417 33645 - GH36
CAZyme HRGMv2_2488_14 HRGMv2_2488_14_30 33638 34582 - CE7
STP HRGMv2_2488_14 HRGMv2_2488_14_31 34805 36109 + SBP_bac_1
TC HRGMv2_2488_14 HRGMv2_2488_14_32 36175 37065 + 3.A.1.1.23
TC HRGMv2_2488_14 HRGMv2_2488_14_33 37067 37990 + 3.A.1.1.31
NULL(UNKNOWN) HRGMv2_2488_14 HRGMv2_2488_14_34 38061 38621 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2488_14 HRGMv2_2488_14_35 38651 40039 + GH1
Gene ID: HRGMv2_2488_14_26
Type: TC
Location: 26974 - 28389 (+)
Gene ID: HRGMv2_2488_14_27
Type: pfam
Location: 28405 - 30189 (+)
Gene ID: HRGMv2_2488_14_28
Type: TC
Location: 30281 - 31393 (-)
Gene ID: HRGMv2_2488_14_29
Type: CAZyme
Location: 31417 - 33645 (-)
Gene ID: HRGMv2_2488_14_30
Type: CAZyme
Location: 33638 - 34582 (-)
Gene ID: HRGMv2_2488_14_31
Type: STP
Location: 34805 - 36109 (+)
Gene ID: HRGMv2_2488_14_32
Type: TC
Location: 36175 - 37065 (+)
Gene ID: HRGMv2_2488_14_33
Type: TC
Location: 37067 - 37990 (+)
Gene ID: HRGMv2_2488_14_34
Type:
Location: 38061 - 38621 (+)
Gene ID: HRGMv2_2488_14_35
Type: CAZyme
Location: 38651 - 40039 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List