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Cluster: HRGMv2_2488_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2488_10 HRGMv2_2488_10_54 58418 59065 - GH73
pfam HRGMv2_2488_10 HRGMv2_2488_10_55 59312 59770 - SprT-like | Zn_ribbon_SprT
CAZyme HRGMv2_2488_10 HRGMv2_2488_10_56 59830 60528 - GT32
TC HRGMv2_2488_10 HRGMv2_2488_10_57 60531 61961 - 2.A.66.2.16
pfam HRGMv2_2488_10 HRGMv2_2488_10_58 61963 63117 - Glyphos_transf
TC HRGMv2_2488_10 HRGMv2_2488_10_59 63207 65876 - 3.A.3.2.28
pfam HRGMv2_2488_10 HRGMv2_2488_10_60 66064 66894 - NAD_synthase
pfam HRGMv2_2488_10 HRGMv2_2488_10_61 66891 68369 - NAPRTase | NAPRTase_N | NAPRTase_C
CAZyme HRGMv2_2488_10 HRGMv2_2488_10_62 68456 69547 - GT4
CAZyme HRGMv2_2488_10 HRGMv2_2488_10_63 69558 70289 - GT26
Gene ID: HRGMv2_2488_10_54
Type: CAZyme
Location: 58418 - 59065 (-)
Gene ID: HRGMv2_2488_10_55
Type: pfam
Location: 59312 - 59770 (-)
Gene ID: HRGMv2_2488_10_56
Type: CAZyme
Location: 59830 - 60528 (-)
Gene ID: HRGMv2_2488_10_57
Type: TC
Location: 60531 - 61961 (-)
Gene ID: HRGMv2_2488_10_58
Type: pfam
Location: 61963 - 63117 (-)
Gene ID: HRGMv2_2488_10_59
Type: TC
Location: 63207 - 65876 (-)
Gene ID: HRGMv2_2488_10_60
Type: pfam
Location: 66064 - 66894 (-)
Gene ID: HRGMv2_2488_10_61
Type: pfam
Location: 66891 - 68369 (-)
Gene ID: HRGMv2_2488_10_62
Type: CAZyme
Location: 68456 - 69547 (-)
Gene ID: HRGMv2_2488_10_63
Type: CAZyme
Location: 69558 - 70289 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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