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Cluster: HRGMv2_2488_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2488_7 HRGMv2_2488_7_103 107601 109349 - 3.A.1.129.1
TC HRGMv2_2488_7 HRGMv2_2488_7_104 109339 111057 - 3.A.1.129.1
TC HRGMv2_2488_7 HRGMv2_2488_7_105 111057 112073 - 3.D.4.3.2
TC HRGMv2_2488_7 HRGMv2_2488_7_106 112075 113505 - 3.D.4.3.2
TF HRGMv2_2488_7 HRGMv2_2488_7_107 113820 114665 - HTH_6
CAZyme HRGMv2_2488_7 HRGMv2_2488_7_108 114681 115823 - GH170
TC HRGMv2_2488_7 HRGMv2_2488_7_109 115789 117231 - 4.A.1.2.7
CAZyme HRGMv2_2488_7 HRGMv2_2488_7_110 117244 118143 - CE1
Gene ID: HRGMv2_2488_7_103
Type: TC
Location: 107601 - 109349 (-)
Gene ID: HRGMv2_2488_7_104
Type: TC
Location: 109339 - 111057 (-)
Gene ID: HRGMv2_2488_7_105
Type: TC
Location: 111057 - 112073 (-)
Gene ID: HRGMv2_2488_7_106
Type: TC
Location: 112075 - 113505 (-)
Gene ID: HRGMv2_2488_7_107
Type: TF
Location: 113820 - 114665 (-)
Gene ID: HRGMv2_2488_7_108
Type: CAZyme
Location: 114681 - 115823 (-)
Gene ID: HRGMv2_2488_7_109
Type: TC
Location: 115789 - 117231 (-)
Gene ID: HRGMv2_2488_7_110
Type: CAZyme
Location: 117244 - 118143 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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