Cluster: HRGMv2_2484_CGC10
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_2484
- CGC Family ID: CGCFAM_04256
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2484_6 | HRGMv2_2484_6_98 | 103544 | 104233 | + | 8.A.3.2.3 |
| TC | HRGMv2_2484_6 | HRGMv2_2484_6_99 | 104248 | 104988 | + | 8.A.3.2.3 |
| TC | HRGMv2_2484_6 | HRGMv2_2484_6_100 | 105027 | 106403 | + | 9.B.18.1.2 |
| CAZyme | HRGMv2_2484_6 | HRGMv2_2484_6_101 | 106436 | 107620 | + | GT4 |
| pfam | HRGMv2_2484_6 | HRGMv2_2484_6_102 | 107662 | 109077 | + | NAD_Gly3P_dh_N | CTP_transf_like | NAD_Gly3P_dh_C | GPD_NAD_C_bact |
| pfam | HRGMv2_2484_6 | HRGMv2_2484_6_103 | 109092 | 109922 | + | LicD |
| CAZyme | HRGMv2_2484_6 | HRGMv2_2484_6_104 | 109915 | 110886 | + | GT32 |
| CAZyme | HRGMv2_2484_6 | HRGMv2_2484_6_105 | 110888 | 111838 | + | GT2 |
| NULL(UNKNOWN) | HRGMv2_2484_6 | HRGMv2_2484_6_106 | 111843 | 112400 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2484_6 | HRGMv2_2484_6_107 | 112414 | 113586 | + | EpsG |
| CAZyme | HRGMv2_2484_6 | HRGMv2_2484_6_108 | 113597 | 114547 | + | GT2 |
| TC | HRGMv2_2484_6 | HRGMv2_2484_6_109 | 114551 | 115987 | + | 2.A.66.2.16 |
Gene ID: HRGMv2_2484_6_98
Type: TC
Location: 103544 - 104233 (+)
Type: TC
Location: 103544 - 104233 (+)
Gene ID: HRGMv2_2484_6_99
Type: TC
Location: 104248 - 104988 (+)
Type: TC
Location: 104248 - 104988 (+)
Gene ID: HRGMv2_2484_6_100
Type: TC
Location: 105027 - 106403 (+)
Type: TC
Location: 105027 - 106403 (+)
Gene ID: HRGMv2_2484_6_101
Type: CAZyme
Location: 106436 - 107620 (+)
Type: CAZyme
Location: 106436 - 107620 (+)
Gene ID: HRGMv2_2484_6_102
Type: pfam
Location: 107662 - 109077 (+)
Type: pfam
Location: 107662 - 109077 (+)
Gene ID: HRGMv2_2484_6_103
Type: pfam
Location: 109092 - 109922 (+)
Type: pfam
Location: 109092 - 109922 (+)
Gene ID: HRGMv2_2484_6_104
Type: CAZyme
Location: 109915 - 110886 (+)
Type: CAZyme
Location: 109915 - 110886 (+)
Gene ID: HRGMv2_2484_6_105
Type: CAZyme
Location: 110888 - 111838 (+)
Type: CAZyme
Location: 110888 - 111838 (+)
Gene ID: HRGMv2_2484_6_106
Type:
Location: 111843 - 112400 (+)
Type:
Location: 111843 - 112400 (+)
Gene ID: HRGMv2_2484_6_107
Type: pfam
Location: 112414 - 113586 (+)
Type: pfam
Location: 112414 - 113586 (+)
Gene ID: HRGMv2_2484_6_108
Type: CAZyme
Location: 113597 - 114547 (+)
Type: CAZyme
Location: 113597 - 114547 (+)
Gene ID: HRGMv2_2484_6_109
Type: TC
Location: 114551 - 115987 (+)
Type: TC
Location: 114551 - 115987 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus lutetiensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.