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Cluster: HRGMv2_2484_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2484_1 HRGMv2_2484_1_37 36109 36660 - GH16_21
NULL(UNKNOWN) HRGMv2_2484_1 HRGMv2_2484_1_38 36762 36953 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2484_1 HRGMv2_2484_1_39 37275 38120 - 3.A.1.1.20
TC HRGMv2_2484_1 HRGMv2_2484_1_40 38120 39064 - 3.A.1.1.4
NULL(UNKNOWN) HRGMv2_2484_1 HRGMv2_2484_1_41 39225 40592 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2484_1 HRGMv2_2484_1_42 40972 43668 + GH94
CAZyme HRGMv2_2484_1 HRGMv2_2484_1_43 43689 46100 + GH94
CAZyme HRGMv2_2484_1 HRGMv2_2484_1_44 46480 47199 - GH16_21
Gene ID: HRGMv2_2484_1_37
Type: CAZyme
Location: 36109 - 36660 (-)
Gene ID: HRGMv2_2484_1_38
Type:
Location: 36762 - 36953 (-)
Gene ID: HRGMv2_2484_1_39
Type: TC
Location: 37275 - 38120 (-)
Gene ID: HRGMv2_2484_1_40
Type: TC
Location: 38120 - 39064 (-)
Gene ID: HRGMv2_2484_1_41
Type:
Location: 39225 - 40592 (-)
Gene ID: HRGMv2_2484_1_42
Type: CAZyme
Location: 40972 - 43668 (+)
Gene ID: HRGMv2_2484_1_43
Type: CAZyme
Location: 43689 - 46100 (+)
Gene ID: HRGMv2_2484_1_44
Type: CAZyme
Location: 46480 - 47199 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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