PROTEIN: HRGMv2_2484_1_41
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Protein File & Metadata
Source:
HRGMv2_2484_1_41.pdb
Genome ID:
Protein ID:
HRGMv2_2484_1_41
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Protein Sequence
MNKKVSAFIA IALAAGTMVG CSSKSSTSAS GVEGKVINIY SWNDEFRQRV EAVYPEVKST 60 SKDGTVTKLK DGSEIHWIIN PNQDGVYQQK LDEALEKQDS ASADDKIDIF LSETDYVRKY 120 TSKKANVAMP LKDLGIDPKK DLADQYAFTK ETASDEDGVQ RGSTWQTCPG VLIYRRDIAK 180 DVFGTDDPTA VGEKVKDWDT MKATSQELLN KGYYTFASYA DTFRLYGNSI SKPWVEDGST 240 TVRVDPQIMN WVKDSKEWLD AGYFNKTVKG QWTDDWNKAM GSQSKVFSFL FPAWGIDFTL 300 KSNWDGADGD WAVTNPPQEY NWGGSYIHGA EGTDNPKHVK EIITALTANK DNLLKISKDY 360 QDFTNTKSGM EAAAKDDSFK SDFLGGENAY SYYAPVAENI KIAPLSSYDQ GCVELIQNAF 420 NDYLQGKVSY NKAKSNFETA IKERYPEITD VKWPD 455
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0F002-F1-model_v4 | 14 | 448 | 31 | 439 | 0.7275 |
0.8089 |
| AF-K0F1Y0-F1-model_v4 | 18 | 449 | 35 | 433 | 0.7187 |
0.8129 |
| AF-K0F8J3-F1-model_v4 | 32 | 449 | 28 | 436 | 0.7013 |
0.7797 |
| AF-Q8DNN7-F1-model_v4 | 33 | 449 | 33 | 436 | 0.7012 |
0.7881 |
| AF-O53485-F1-model_v4 | 33 | 450 | 34 | 439 | 0.7 |
0.7844 |
| AF-Q9CBN6-F1-model_v4 | 32 | 448 | 37 | 446 | 0.6994 |
0.7824 |
| AF-Q7AQ51-F1-model_v4 | 33 | 451 | 33 | 445 | 0.6978 |
0.7744 |
| AF-A0A132Z3C8-F1-model_v4 | 34 | 449 | 33 | 428 | 0.697 |
0.7921 |
| AF-K0EMP7-F1-model_v4 | 22 | 449 | 20 | 443 | 0.6942 |
0.7542 |
| AF-Q8DNU8-F1-model_v4 | 32 | 449 | 38 | 440 | 0.6896 |
0.7813 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-K8EJG7-F1-model_v4 | CBM50 , CE4 | 31 | 450 | 32 | 416 | 0.6705 |
0.7723 |
| AF-A0A7U1BNH7-F1-model_v4 | GH10 | 32 | 454 | 28 | 738 | 0.5482 |
0.7334 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| K8EJG7 | CBM50 , CE4 | 31 | 450 | 32 | 416 | 0.6705 |
0.7723 |
| A0A7U1BNH7 | GH10 | 32 | 454 | 28 | 738 | 0.5482 |
0.7334 |
| A0A9Q8PNJ5 | GH4 | 1 | 450 | 224 | 866 | 0.5406 |
0.72 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5ixp-assembly1.cif.gz_A | 32 | 448 | 1 | 393 | 0.8205 |
0.8942 |
| 3uor-assembly2.cif.gz_B | 33 | 450 | 1 | 389 | 0.7536 |
0.8346 |
| 8bfy-assembly1.cif.gz_A | 35 | 447 | 2 | 393 | 0.7485 |
0.8257 |
| 2z8d-assembly2.cif.gz_B | 29 | 452 | 1 | 399 | 0.7464 |
0.8143 |
| 6x84-assembly2.cif.gz_B | 32 | 449 | 1 | 412 | 0.7463 |
0.8028 |
| 7vfq-assembly2.cif.gz_B | 34 | 453 | 1 | 396 | 0.7445 |
0.8148 |
| 7vfq-assembly4.cif.gz_D | 34 | 454 | 1 | 397 | 0.7438 |
0.8133 |
| 7vfr-assembly1.cif.gz_A | 33 | 453 | 1 | 397 | 0.7438 |
0.8131 |
| 2z8d-assembly1.cif.gz_A | 30 | 453 | 1 | 401 | 0.743 |
0.8094 |
| 7vfq-assembly1.cif.gz_A | 34 | 453 | 1 | 394 | 0.743 |
0.815 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P94528-F1-model_v4 | 33 | 450 | 32 | 433 | 0.7642 |
0.855 |
| AF-P29822-F1-model_v4 | 32 | 447 | 26 | 422 | 0.7562 |
0.8469 |
| AF-Q9KEE7-F1-model_v4 | 34 | 450 | 44 | 445 | 0.7357 |
0.836 |
| AF-Q9K491-F1-model_v4 | 25 | 448 | 25 | 424 | 0.7265 |
0.8135 |
| AF-Q8FVS7-F1-model_v4 | 32 | 451 | 23 | 411 | 0.7079 |
0.8018 |
| AF-Q578M8-F1-model_v4 | 32 | 451 | 23 | 411 | 0.7073 |
0.8011 |
| AF-Q2YKZ9-F1-model_v4 | 32 | 451 | 23 | 411 | 0.7066 |
0.8002 |
| AF-Q55471-F1-model_v4 | 29 | 448 | 25 | 421 | 0.7051 |
0.7907 |
| AF-Q926H8-F1-model_v4 | 32 | 450 | 19 | 429 | 0.6983 |
0.7698 |
| AF-O07009-F1-model_v4 | 25 | 449 | 27 | 419 | 0.6947 |
0.7889 |