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Cluster: HRGMv2_2483_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2483_1 HRGMv2_2483_1_654 672275 673225 - CE4
STP HRGMv2_2483_1 HRGMv2_2483_1_655 673448 674734 + ACT
pfam HRGMv2_2483_1 HRGMv2_2483_1_656 674793 675659 + GHMP_kinases_N | GHMP_kinases_C
TC HRGMv2_2483_1 HRGMv2_2483_1_657 675646 676533 + 2.A.7.7.2
pfam HRGMv2_2483_1 HRGMv2_2483_1_658 676549 678267 + Chorismate_bind | Aminotran_4
TC HRGMv2_2483_1 HRGMv2_2483_1_659 678516 679199 + 3.A.1.3.16
TC HRGMv2_2483_1 HRGMv2_2483_1_660 679159 679836 + 3.A.1.3.25
TC HRGMv2_2483_1 HRGMv2_2483_1_661 679842 680588 + 3.A.1.3.4
TC HRGMv2_2483_1 HRGMv2_2483_1_662 680622 681500 + 3.A.1.3.10
Gene ID: HRGMv2_2483_1_654
Type: CAZyme
Location: 672275 - 673225 (-)
Gene ID: HRGMv2_2483_1_655
Type: STP
Location: 673448 - 674734 (+)
Gene ID: HRGMv2_2483_1_656
Type: pfam
Location: 674793 - 675659 (+)
Gene ID: HRGMv2_2483_1_657
Type: TC
Location: 675646 - 676533 (+)
Gene ID: HRGMv2_2483_1_658
Type: pfam
Location: 676549 - 678267 (+)
Gene ID: HRGMv2_2483_1_659
Type: TC
Location: 678516 - 679199 (+)
Gene ID: HRGMv2_2483_1_660
Type: TC
Location: 679159 - 679836 (+)
Gene ID: HRGMv2_2483_1_661
Type: TC
Location: 679842 - 680588 (+)
Gene ID: HRGMv2_2483_1_662
Type: TC
Location: 680622 - 681500 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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