dbCAN HGM

Cluster: HRGMv2_2483_CGC6

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	HRGMv2_2483_1	HRGMv2_2483_1_402	403305	405593	+	CBM67 \| GH78
TF	HRGMv2_2483_1	HRGMv2_2483_1_403	405613	406602	-	HTH_AraC
TC	HRGMv2_2483_1	HRGMv2_2483_1_404	406704	408092	+	4.A.1.2.6
CAZyme	HRGMv2_2483_1	HRGMv2_2483_1_405	408120	410648	+	GH106
CAZyme	HRGMv2_2483_1	HRGMv2_2483_1_406	410875	412416	-	CBM91 \| GH43_12
pfam	HRGMv2_2483_1	HRGMv2_2483_1_407	412469	413131	-	Hydrolase \| HAD_2
CAZyme	HRGMv2_2483_1	HRGMv2_2483_1_408	413135	415936	-	CBM67 \| GH78
CAZyme	HRGMv2_2483_1	HRGMv2_2483_1_409	415948	417642	-	GH3
TF	HRGMv2_2483_1	HRGMv2_2483_1_410	417868	418866	+	HTH_AraC \| HTH_AraC
TF	HRGMv2_2483_1	HRGMv2_2483_1_411	418876	419868	-	HTH_AraC
CAZyme	HRGMv2_2483_1	HRGMv2_2483_1_412	419993	422398	+	GH2

Gene ID: HRGMv2_2483_1_402
Type: CAZyme
Location: 403305 - 405593 (+)

Gene ID: HRGMv2_2483_1_403
Type: TF
Location: 405613 - 406602 (-)

Gene ID: HRGMv2_2483_1_404
Type: TC
Location: 406704 - 408092 (+)

Gene ID: HRGMv2_2483_1_405
Type: CAZyme
Location: 408120 - 410648 (+)

Gene ID: HRGMv2_2483_1_406
Type: CAZyme
Location: 410875 - 412416 (-)

Gene ID: HRGMv2_2483_1_407
Type: pfam
Location: 412469 - 413131 (-)

Gene ID: HRGMv2_2483_1_408
Type: CAZyme
Location: 413135 - 415936 (-)

Gene ID: HRGMv2_2483_1_409
Type: CAZyme
Location: 415948 - 417642 (-)

Gene ID: HRGMv2_2483_1_410
Type: TF
Location: 417868 - 418866 (+)

Gene ID: HRGMv2_2483_1_411
Type: TF
Location: 418876 - 419868 (-)

Gene ID: HRGMv2_2483_1_412
Type: CAZyme
Location: 419993 - 422398 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.