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Cluster: HRGMv2_2483_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2483_2 HRGMv2_2483_2_188 195133 196596 - GH1
TC HRGMv2_2483_2 HRGMv2_2483_2_189 197040 198368 + 2.A.25.1.4
TC HRGMv2_2483_2 HRGMv2_2483_2_190 198542 199759 + 2.A.4.7.6
TC HRGMv2_2483_2 HRGMv2_2483_2_191 199855 200697 - 3.A.1.3.12
TC HRGMv2_2483_2 HRGMv2_2483_2_192 200721 201350 - 3.A.1.3.2
TC HRGMv2_2483_2 HRGMv2_2483_2_193 201362 202003 - 3.A.1.3.15
pfam HRGMv2_2483_2 HRGMv2_2483_2_194 202189 202521 - YjdM | Zn_Ribbon_YjdM
pfam HRGMv2_2483_2 HRGMv2_2483_2_195 202710 203855 - Mannitol_dh | Mannitol_dh_C
TC HRGMv2_2483_2 HRGMv2_2483_2_196 203873 204310 - 4.A.2.1.2
TF HRGMv2_2483_2 HRGMv2_2483_2_197 204313 206265 - HTH_11 | HTH_11
TC HRGMv2_2483_2 HRGMv2_2483_2_198 206291 208060 - 4.A.2.1.5
STP HRGMv2_2483_2 HRGMv2_2483_2_199 208586 210400 - SIS | SIS
TC HRGMv2_2483_2 HRGMv2_2483_2_200 210633 212027 - 3.A.1.117.3
NULL(UNKNOWN) HRGMv2_2483_2 HRGMv2_2483_2_201 212024 212356 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2483_2 HRGMv2_2483_2_202 212363 214084 - 3.A.1.117.2
Gene ID: HRGMv2_2483_2_188
Type: CAZyme
Location: 195133 - 196596 (-)
Gene ID: HRGMv2_2483_2_189
Type: TC
Location: 197040 - 198368 (+)
Gene ID: HRGMv2_2483_2_190
Type: TC
Location: 198542 - 199759 (+)
Gene ID: HRGMv2_2483_2_191
Type: TC
Location: 199855 - 200697 (-)
Gene ID: HRGMv2_2483_2_192
Type: TC
Location: 200721 - 201350 (-)
Gene ID: HRGMv2_2483_2_193
Type: TC
Location: 201362 - 202003 (-)
Gene ID: HRGMv2_2483_2_194
Type: pfam
Location: 202189 - 202521 (-)
Gene ID: HRGMv2_2483_2_195
Type: pfam
Location: 202710 - 203855 (-)
Gene ID: HRGMv2_2483_2_196
Type: TC
Location: 203873 - 204310 (-)
Gene ID: HRGMv2_2483_2_197
Type: TF
Location: 204313 - 206265 (-)
Gene ID: HRGMv2_2483_2_198
Type: TC
Location: 206291 - 208060 (-)
Gene ID: HRGMv2_2483_2_199
Type: STP
Location: 208586 - 210400 (-)
Gene ID: HRGMv2_2483_2_200
Type: TC
Location: 210633 - 212027 (-)
Gene ID: HRGMv2_2483_2_201
Type:
Location: 212024 - 212356 (-)
Gene ID: HRGMv2_2483_2_202
Type: TC
Location: 212363 - 214084 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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