Cluster: HRGMv2_2483_CGC13
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2483
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2483_2 | HRGMv2_2483_2_130 | 126837 | 128162 | - | 2.A.66.1.28 |
| pfam | HRGMv2_2483_2 | HRGMv2_2483_2_131 | 128273 | 129955 | - | Gram_pos_anchor | GbpC |
| CAZyme | HRGMv2_2483_2 | HRGMv2_2483_2_132 | 130133 | 134569 | - | GH70 |
| TF | HRGMv2_2483_2 | HRGMv2_2483_2_133 | 134662 | 135525 | - | HTH_3 |
| CAZyme | HRGMv2_2483_2 | HRGMv2_2483_2_134 | 135873 | 140441 | - | GH70 |
| TF | HRGMv2_2483_2 | HRGMv2_2483_2_135 | 140503 | 141393 | - | HTH_3 |
| CAZyme | HRGMv2_2483_2 | HRGMv2_2483_2_136 | 141688 | 143082 | - | GT1 |
Gene ID: HRGMv2_2483_2_130
Type: TC
Location: 126837 - 128162 (-)
Type: TC
Location: 126837 - 128162 (-)
Gene ID: HRGMv2_2483_2_131
Type: pfam
Location: 128273 - 129955 (-)
Type: pfam
Location: 128273 - 129955 (-)
Gene ID: HRGMv2_2483_2_132
Type: CAZyme
Location: 130133 - 134569 (-)
Type: CAZyme
Location: 130133 - 134569 (-)
Gene ID: HRGMv2_2483_2_133
Type: TF
Location: 134662 - 135525 (-)
Type: TF
Location: 134662 - 135525 (-)
Gene ID: HRGMv2_2483_2_134
Type: CAZyme
Location: 135873 - 140441 (-)
Type: CAZyme
Location: 135873 - 140441 (-)
Gene ID: HRGMv2_2483_2_135
Type: TF
Location: 140503 - 141393 (-)
Type: TF
Location: 140503 - 141393 (-)
Gene ID: HRGMv2_2483_2_136
Type: CAZyme
Location: 141688 - 143082 (-)
Type: CAZyme
Location: 141688 - 143082 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus gallolyticus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.