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Cluster: HRGMv2_2477_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2477_2 HRGMv2_2477_2_113 96809 99472 - 3.A.3.2.28
pfam HRGMv2_2477_2 HRGMv2_2477_2_114 99813 100550 + DUF1275
TC HRGMv2_2477_2 HRGMv2_2477_2_115 100949 101797 + 3.A.1.24.6
TC HRGMv2_2477_2 HRGMv2_2477_2_116 101914 102759 + 3.A.1.24.6
peptidase HRGMv2_2477_2 HRGMv2_2477_2_117 102822 104168 + M20.UNW
TC HRGMv2_2477_2 HRGMv2_2477_2_118 104173 105252 + 3.A.1.24.3
TC HRGMv2_2477_2 HRGMv2_2477_2_119 105255 105950 + 3.A.1.24.6
TF HRGMv2_2477_2 HRGMv2_2477_2_120 106111 106818 - GntR
CAZyme HRGMv2_2477_2 HRGMv2_2477_2_121 106818 107915 - CE9
pfam HRGMv2_2477_2 HRGMv2_2477_2_122 108122 108622 - PgpA
STP HRGMv2_2477_2 HRGMv2_2477_2_123 108904 110241 - Pyr_redox_2
TC HRGMv2_2477_2 HRGMv2_2477_2_124 110599 111180 + 3.A.1.30.2
TC HRGMv2_2477_2 HRGMv2_2477_2_125 111173 112582 + 3.A.1.30.1
NULL(UNKNOWN) HRGMv2_2477_2 HRGMv2_2477_2_126 112579 113241 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2477_2 HRGMv2_2477_2_127 113252 113923 + TENA_THI-4
TC HRGMv2_2477_2 HRGMv2_2477_2_128 113954 115309 - 2.A.1.3.61
Gene ID: HRGMv2_2477_2_113
Type: TC
Location: 96809 - 99472 (-)
Gene ID: HRGMv2_2477_2_114
Type: pfam
Location: 99813 - 100550 (+)
Gene ID: HRGMv2_2477_2_115
Type: TC
Location: 100949 - 101797 (+)
Gene ID: HRGMv2_2477_2_116
Type: TC
Location: 101914 - 102759 (+)
Gene ID: HRGMv2_2477_2_117
Type: peptidase
Location: 102822 - 104168 (+)
Gene ID: HRGMv2_2477_2_118
Type: TC
Location: 104173 - 105252 (+)
Gene ID: HRGMv2_2477_2_119
Type: TC
Location: 105255 - 105950 (+)
Gene ID: HRGMv2_2477_2_120
Type: TF
Location: 106111 - 106818 (-)
Gene ID: HRGMv2_2477_2_121
Type: CAZyme
Location: 106818 - 107915 (-)
Gene ID: HRGMv2_2477_2_122
Type: pfam
Location: 108122 - 108622 (-)
Gene ID: HRGMv2_2477_2_123
Type: STP
Location: 108904 - 110241 (-)
Gene ID: HRGMv2_2477_2_124
Type: TC
Location: 110599 - 111180 (+)
Gene ID: HRGMv2_2477_2_125
Type: TC
Location: 111173 - 112582 (+)
Gene ID: HRGMv2_2477_2_126
Type:
Location: 112579 - 113241 (+)
Gene ID: HRGMv2_2477_2_127
Type: pfam
Location: 113252 - 113923 (+)
Gene ID: HRGMv2_2477_2_128
Type: TC
Location: 113954 - 115309 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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