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Cluster: HRGMv2_2477_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2477_9 HRGMv2_2477_9_58 58701 60149 - 4.C.1.1.6
TF HRGMv2_2477_9 HRGMv2_2477_9_59 60238 60684 + Pencillinase_R
TC HRGMv2_2477_9 HRGMv2_2477_9_60 60674 62800 + 3.A.3.5.2
pfam HRGMv2_2477_9 HRGMv2_2477_9_61 62814 63551 - DUF1003
TC HRGMv2_2477_9 HRGMv2_2477_9_62 63653 65008 - 2.A.8.1.1
TC HRGMv2_2477_9 HRGMv2_2477_9_63 65300 66019 + 1.A.8.13.3
pfam HRGMv2_2477_9 HRGMv2_2477_9_64 66058 66975 - PseudoU_synth_2
TF HRGMv2_2477_9 HRGMv2_2477_9_65 66972 67457 - MerR
CAZyme HRGMv2_2477_9 HRGMv2_2477_9_66 67494 68561 - GT4
Gene ID: HRGMv2_2477_9_58
Type: TC
Location: 58701 - 60149 (-)
Gene ID: HRGMv2_2477_9_59
Type: TF
Location: 60238 - 60684 (+)
Gene ID: HRGMv2_2477_9_60
Type: TC
Location: 60674 - 62800 (+)
Gene ID: HRGMv2_2477_9_61
Type: pfam
Location: 62814 - 63551 (-)
Gene ID: HRGMv2_2477_9_62
Type: TC
Location: 63653 - 65008 (-)
Gene ID: HRGMv2_2477_9_63
Type: TC
Location: 65300 - 66019 (+)
Gene ID: HRGMv2_2477_9_64
Type: pfam
Location: 66058 - 66975 (-)
Gene ID: HRGMv2_2477_9_65
Type: TF
Location: 66972 - 67457 (-)
Gene ID: HRGMv2_2477_9_66
Type: CAZyme
Location: 67494 - 68561 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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