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Cluster: HRGMv2_2477_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2477_9 HRGMv2_2477_9_11 13407 14033 - CBM50
pfam HRGMv2_2477_9 HRGMv2_2477_9_12 14184 15692 - Metallophos | 5_nucleotid_C
TC HRGMv2_2477_9 HRGMv2_2477_9_13 15735 16544 - 3.A.1.9.1
pfam HRGMv2_2477_9 HRGMv2_2477_9_14 16556 17377 - BPD_transp_1
TC HRGMv2_2477_9 HRGMv2_2477_9_15 17377 18123 - 3.A.1.9.1
pfam HRGMv2_2477_9 HRGMv2_2477_9_16 18277 19323 - CypI | Phosphonate-bd
pfam HRGMv2_2477_9 HRGMv2_2477_9_17 19655 20095 - ATP-synt_DE | ATP-synt_DE_N
TC HRGMv2_2477_9 HRGMv2_2477_9_18 20110 21510 - 3.A.2.1.5
TC HRGMv2_2477_9 HRGMv2_2477_9_19 21616 22524 - 3.A.2.1.1
TC HRGMv2_2477_9 HRGMv2_2477_9_20 22540 24054 - 3.A.2.1.5
TC HRGMv2_2477_9 HRGMv2_2477_9_21 24067 24609 - 3.A.2.1.7
pfam HRGMv2_2477_9 HRGMv2_2477_9_22 24621 25130 - ATP-synt_B
pfam HRGMv2_2477_9 HRGMv2_2477_9_23 25157 25384 - ATP-synt_C
TC HRGMv2_2477_9 HRGMv2_2477_9_24 25515 26240 - 3.A.2.1.2
TC HRGMv2_2477_9 HRGMv2_2477_9_25 26634 27905 - 2.A.40.1.2
Gene ID: HRGMv2_2477_9_11
Type: CAZyme
Location: 13407 - 14033 (-)
Gene ID: HRGMv2_2477_9_12
Type: pfam
Location: 14184 - 15692 (-)
Gene ID: HRGMv2_2477_9_13
Type: TC
Location: 15735 - 16544 (-)
Gene ID: HRGMv2_2477_9_14
Type: pfam
Location: 16556 - 17377 (-)
Gene ID: HRGMv2_2477_9_15
Type: TC
Location: 17377 - 18123 (-)
Gene ID: HRGMv2_2477_9_16
Type: pfam
Location: 18277 - 19323 (-)
Gene ID: HRGMv2_2477_9_17
Type: pfam
Location: 19655 - 20095 (-)
Gene ID: HRGMv2_2477_9_18
Type: TC
Location: 20110 - 21510 (-)
Gene ID: HRGMv2_2477_9_19
Type: TC
Location: 21616 - 22524 (-)
Gene ID: HRGMv2_2477_9_20
Type: TC
Location: 22540 - 24054 (-)
Gene ID: HRGMv2_2477_9_21
Type: TC
Location: 24067 - 24609 (-)
Gene ID: HRGMv2_2477_9_22
Type: pfam
Location: 24621 - 25130 (-)
Gene ID: HRGMv2_2477_9_23
Type: pfam
Location: 25157 - 25384 (-)
Gene ID: HRGMv2_2477_9_24
Type: TC
Location: 25515 - 26240 (-)
Gene ID: HRGMv2_2477_9_25
Type: TC
Location: 26634 - 27905 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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