dbCAN Logo

Cluster: HRGMv2_2477_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2477_8 HRGMv2_2477_8_69 62221 62856 + 3.A.1.124.1
NULL(UNKNOWN) HRGMv2_2477_8 HRGMv2_2477_8_70 62843 63616 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2477_8 HRGMv2_2477_8_71 63667 64449 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2477_8 HRGMv2_2477_8_72 64458 65276 + 3.A.1.106.15
TF HRGMv2_2477_8 HRGMv2_2477_8_73 65333 66328 - LacI
TC HRGMv2_2477_8 HRGMv2_2477_8_74 66500 67843 + 2.A.2.6.2
CAZyme HRGMv2_2477_8 HRGMv2_2477_8_75 67859 69541 + GH13_31
STP HRGMv2_2477_8 HRGMv2_2477_8_76 69593 70432 - Glyoxalase
pfam HRGMv2_2477_8 HRGMv2_2477_8_77 70699 70944 + Transgly_assoc
TC HRGMv2_2477_8 HRGMv2_2477_8_78 71088 72626 + 2.A.49.5.5
Gene ID: HRGMv2_2477_8_69
Type: TC
Location: 62221 - 62856 (+)
Gene ID: HRGMv2_2477_8_70
Type:
Location: 62843 - 63616 (+)
Gene ID: HRGMv2_2477_8_71
Type:
Location: 63667 - 64449 (+)
Gene ID: HRGMv2_2477_8_72
Type: TC
Location: 64458 - 65276 (+)
Gene ID: HRGMv2_2477_8_73
Type: TF
Location: 65333 - 66328 (-)
Gene ID: HRGMv2_2477_8_74
Type: TC
Location: 66500 - 67843 (+)
Gene ID: HRGMv2_2477_8_75
Type: CAZyme
Location: 67859 - 69541 (+)
Gene ID: HRGMv2_2477_8_76
Type: STP
Location: 69593 - 70432 (-)
Gene ID: HRGMv2_2477_8_77
Type: pfam
Location: 70699 - 70944 (+)
Gene ID: HRGMv2_2477_8_78
Type: TC
Location: 71088 - 72626 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List