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Cluster: HRGMv2_2477_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2477_8 HRGMv2_2477_8_41 36653 37582 + 2.A.7.21.4
pfam HRGMv2_2477_8 HRGMv2_2477_8_42 37756 38607 + NAD_binding_10
TF HRGMv2_2477_8 HRGMv2_2477_8_43 38676 39101 + Rrf2
TC HRGMv2_2477_8 HRGMv2_2477_8_44 39263 40036 + 2.A.79.1.4
pfam HRGMv2_2477_8 HRGMv2_2477_8_45 40048 40491 + ThrE | ThrE_2
pfam HRGMv2_2477_8 HRGMv2_2477_8_46 40687 40881 + Cation_ATPase_N
TC HRGMv2_2477_8 HRGMv2_2477_8_47 40888 43386 + 3.A.3.2.41
TC HRGMv2_2477_8 HRGMv2_2477_8_48 43571 45022 + 2.A.1.1.41
CAZyme HRGMv2_2477_8 HRGMv2_2477_8_49 45240 47057 + GH73
TC HRGMv2_2477_8 HRGMv2_2477_8_50 47260 48582 + 4.A.3.2.8
TC HRGMv2_2477_8 HRGMv2_2477_8_51 48664 48981 + 4.A.3.2.4
TC HRGMv2_2477_8 HRGMv2_2477_8_52 48987 49301 + 4.A.3.2.4
CAZyme HRGMv2_2477_8 HRGMv2_2477_8_53 49316 50788 + GH1
TC HRGMv2_2477_8 HRGMv2_2477_8_54 50843 52246 - 3.A.1.121.5
Gene ID: HRGMv2_2477_8_41
Type: TC
Location: 36653 - 37582 (+)
Gene ID: HRGMv2_2477_8_42
Type: pfam
Location: 37756 - 38607 (+)
Gene ID: HRGMv2_2477_8_43
Type: TF
Location: 38676 - 39101 (+)
Gene ID: HRGMv2_2477_8_44
Type: TC
Location: 39263 - 40036 (+)
Gene ID: HRGMv2_2477_8_45
Type: pfam
Location: 40048 - 40491 (+)
Gene ID: HRGMv2_2477_8_46
Type: pfam
Location: 40687 - 40881 (+)
Gene ID: HRGMv2_2477_8_47
Type: TC
Location: 40888 - 43386 (+)
Gene ID: HRGMv2_2477_8_48
Type: TC
Location: 43571 - 45022 (+)
Gene ID: HRGMv2_2477_8_49
Type: CAZyme
Location: 45240 - 47057 (+)
Gene ID: HRGMv2_2477_8_50
Type: TC
Location: 47260 - 48582 (+)
Gene ID: HRGMv2_2477_8_51
Type: TC
Location: 48664 - 48981 (+)
Gene ID: HRGMv2_2477_8_52
Type: TC
Location: 48987 - 49301 (+)
Gene ID: HRGMv2_2477_8_53
Type: CAZyme
Location: 49316 - 50788 (+)
Gene ID: HRGMv2_2477_8_54
Type: TC
Location: 50843 - 52246 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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