dbCAN Logo

Cluster: HRGMv2_2477_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2477_7 HRGMv2_2477_7_67 65711 66841 - GT2
TC HRGMv2_2477_7 HRGMv2_2477_7_68 66864 67691 - 3.A.1.104.1
TC HRGMv2_2477_7 HRGMv2_2477_7_69 67697 68677 - 3.A.1.104.1
TF HRGMv2_2477_7 HRGMv2_2477_7_70 68802 69518 - Trans_reg_C
STP HRGMv2_2477_7 HRGMv2_2477_7_71 69515 72097 - HATPase_c | HisKA
TC HRGMv2_2477_7 HRGMv2_2477_7_72 72110 72658 - 3.A.3.7.1
TC HRGMv2_2477_7 HRGMv2_2477_7_73 72667 73311 - 3.A.3.7.2
TC HRGMv2_2477_7 HRGMv2_2477_7_74 73348 74682 - 3.A.3.7.1
TC HRGMv2_2477_7 HRGMv2_2477_7_75 74693 76354 - 3.A.3.7.1
pfam HRGMv2_2477_7 HRGMv2_2477_7_76 76572 77768 - CMAS | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25
CAZyme HRGMv2_2477_7 HRGMv2_2477_7_77 77910 79193 - PL1_6
Gene ID: HRGMv2_2477_7_67
Type: CAZyme
Location: 65711 - 66841 (-)
Gene ID: HRGMv2_2477_7_68
Type: TC
Location: 66864 - 67691 (-)
Gene ID: HRGMv2_2477_7_69
Type: TC
Location: 67697 - 68677 (-)
Gene ID: HRGMv2_2477_7_70
Type: TF
Location: 68802 - 69518 (-)
Gene ID: HRGMv2_2477_7_71
Type: STP
Location: 69515 - 72097 (-)
Gene ID: HRGMv2_2477_7_72
Type: TC
Location: 72110 - 72658 (-)
Gene ID: HRGMv2_2477_7_73
Type: TC
Location: 72667 - 73311 (-)
Gene ID: HRGMv2_2477_7_74
Type: TC
Location: 73348 - 74682 (-)
Gene ID: HRGMv2_2477_7_75
Type: TC
Location: 74693 - 76354 (-)
Gene ID: HRGMv2_2477_7_76
Type: pfam
Location: 76572 - 77768 (-)
Gene ID: HRGMv2_2477_7_77
Type: CAZyme
Location: 77910 - 79193 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List