Cluster: HRGMv2_2477_CGC15
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2477
- CGC Family ID: CGCFAM_08248
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2477_6 | HRGMv2_2477_6_94 | 88214 | 89842 | - | 3.A.1.5.25 |
| NULL(UNKNOWN) | HRGMv2_2477_6 | HRGMv2_2477_6_95 | 90087 | 90296 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2477_6 | HRGMv2_2477_6_96 | 90364 | 91218 | - | GT8 |
| STP | HRGMv2_2477_6 | HRGMv2_2477_6_97 | 91316 | 92476 | + | AAA |
| TF | HRGMv2_2477_6 | HRGMv2_2477_6_98 | 92715 | 93104 | - | HTH_5 |
| TC | HRGMv2_2477_6 | HRGMv2_2477_6_99 | 93055 | 93666 | - | 2.A.77.1.1 |
| pfam | HRGMv2_2477_6 | HRGMv2_2477_6_100 | 94033 | 94494 | - | Usp |
| TC | HRGMv2_2477_6 | HRGMv2_2477_6_101 | 94521 | 95924 | - | 2.A.55.2.6 |
| pfam | HRGMv2_2477_6 | HRGMv2_2477_6_102 | 96369 | 97073 | - | SIR2 |
| NULL(UNKNOWN) | HRGMv2_2477_6 | HRGMv2_2477_6_103 | 97086 | 98027 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2477_6 | HRGMv2_2477_6_104 | 98024 | 99238 | - | 2.A.6.6.11 |
| pfam | HRGMv2_2477_6 | HRGMv2_2477_6_105 | 99231 | 100151 | - | Ppx-GppA |
| TC | HRGMv2_2477_6 | HRGMv2_2477_6_106 | 100308 | 101027 | - | 9.B.105.3.4 |
Gene ID: HRGMv2_2477_6_94
Type: TC
Location: 88214 - 89842 (-)
Type: TC
Location: 88214 - 89842 (-)
Gene ID: HRGMv2_2477_6_95
Type:
Location: 90087 - 90296 (+)
Type:
Location: 90087 - 90296 (+)
Gene ID: HRGMv2_2477_6_96
Type: CAZyme
Location: 90364 - 91218 (-)
Type: CAZyme
Location: 90364 - 91218 (-)
Gene ID: HRGMv2_2477_6_97
Type: STP
Location: 91316 - 92476 (+)
Type: STP
Location: 91316 - 92476 (+)
Gene ID: HRGMv2_2477_6_98
Type: TF
Location: 92715 - 93104 (-)
Type: TF
Location: 92715 - 93104 (-)
Gene ID: HRGMv2_2477_6_99
Type: TC
Location: 93055 - 93666 (-)
Type: TC
Location: 93055 - 93666 (-)
Gene ID: HRGMv2_2477_6_100
Type: pfam
Location: 94033 - 94494 (-)
Type: pfam
Location: 94033 - 94494 (-)
Gene ID: HRGMv2_2477_6_101
Type: TC
Location: 94521 - 95924 (-)
Type: TC
Location: 94521 - 95924 (-)
Gene ID: HRGMv2_2477_6_102
Type: pfam
Location: 96369 - 97073 (-)
Type: pfam
Location: 96369 - 97073 (-)
Gene ID: HRGMv2_2477_6_103
Type:
Location: 97086 - 98027 (-)
Type:
Location: 97086 - 98027 (-)
Gene ID: HRGMv2_2477_6_104
Type: TC
Location: 98024 - 99238 (-)
Type: TC
Location: 98024 - 99238 (-)
Gene ID: HRGMv2_2477_6_105
Type: pfam
Location: 99231 - 100151 (-)
Type: pfam
Location: 99231 - 100151 (-)
Gene ID: HRGMv2_2477_6_106
Type: TC
Location: 100308 - 101027 (-)
Type: TC
Location: 100308 - 101027 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Leuconostoc
Species
Leuconostoc lactis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.