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Cluster: HRGMv2_2477_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2477_6 HRGMv2_2477_6_8 7545 8990 - 3.A.1.3.25
TC HRGMv2_2477_6 HRGMv2_2477_6_9 9088 9840 - 3.A.1.3.25
TC HRGMv2_2477_6 HRGMv2_2477_6_10 9837 11285 - 3.A.1.3.25
TC HRGMv2_2477_6 HRGMv2_2477_6_11 11447 12508 - 3.A.1.2.17
CAZyme HRGMv2_2477_6 HRGMv2_2477_6_12 12711 13694 + GT113
pfam HRGMv2_2477_6 HRGMv2_2477_6_13 13912 14307 - Imm33 | Imm33-like
NULL(UNKNOWN) HRGMv2_2477_6 HRGMv2_2477_6_14 14376 14681 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2477_6 HRGMv2_2477_6_15 14678 15448 - 9.B.141.1.2
TC HRGMv2_2477_6 HRGMv2_2477_6_16 15445 16527 - 9.B.141.1.3
Gene ID: HRGMv2_2477_6_8
Type: TC
Location: 7545 - 8990 (-)
Gene ID: HRGMv2_2477_6_9
Type: TC
Location: 9088 - 9840 (-)
Gene ID: HRGMv2_2477_6_10
Type: TC
Location: 9837 - 11285 (-)
Gene ID: HRGMv2_2477_6_11
Type: TC
Location: 11447 - 12508 (-)
Gene ID: HRGMv2_2477_6_12
Type: CAZyme
Location: 12711 - 13694 (+)
Gene ID: HRGMv2_2477_6_13
Type: pfam
Location: 13912 - 14307 (-)
Gene ID: HRGMv2_2477_6_14
Type:
Location: 14376 - 14681 (-)
Gene ID: HRGMv2_2477_6_15
Type: TC
Location: 14678 - 15448 (-)
Gene ID: HRGMv2_2477_6_16
Type: TC
Location: 15445 - 16527 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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