Cluster: HRGMv2_2477_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2477
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2477_1 | HRGMv2_2477_1_42 | 41299 | 42771 | + | 3.D.4.3.2 |
| TC | HRGMv2_2477_1 | HRGMv2_2477_1_43 | 42771 | 43784 | + | 3.D.4.3.2 |
| TC | HRGMv2_2477_1 | HRGMv2_2477_1_44 | 43897 | 45618 | + | 3.A.1.129.1 |
| TC | HRGMv2_2477_1 | HRGMv2_2477_1_45 | 45615 | 47342 | + | 3.A.1.129.1 |
| CAZyme | HRGMv2_2477_1 | HRGMv2_2477_1_46 | 47342 | 47977 | + | GH73 |
Gene ID: HRGMv2_2477_1_42
Type: TC
Location: 41299 - 42771 (+)
Type: TC
Location: 41299 - 42771 (+)
Gene ID: HRGMv2_2477_1_43
Type: TC
Location: 42771 - 43784 (+)
Type: TC
Location: 42771 - 43784 (+)
Gene ID: HRGMv2_2477_1_44
Type: TC
Location: 43897 - 45618 (+)
Type: TC
Location: 43897 - 45618 (+)
Gene ID: HRGMv2_2477_1_45
Type: TC
Location: 45615 - 47342 (+)
Type: TC
Location: 45615 - 47342 (+)
Gene ID: HRGMv2_2477_1_46
Type: CAZyme
Location: 47342 - 47977 (+)
Type: CAZyme
Location: 47342 - 47977 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Leuconostoc
Species
Leuconostoc lactis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.