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Cluster: HRGMv2_2474_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2474_2 HRGMv2_2474_2_32 39521 41077 + 3.A.1.121.4
TC HRGMv2_2474_2 HRGMv2_2474_2_33 41243 42418 + 2.A.45.2.6
TC HRGMv2_2474_2 HRGMv2_2474_2_34 42476 43126 + 3.A.11.1.2
TC HRGMv2_2474_2 HRGMv2_2474_2_35 43146 45356 + 3.A.11.1.2
CAZyme HRGMv2_2474_2 HRGMv2_2474_2_36 45511 46287 + CE1
pfam HRGMv2_2474_2 HRGMv2_2474_2_37 46483 46698 + ATP-synt_C
TC HRGMv2_2474_2 HRGMv2_2474_2_38 46753 47466 + 3.A.2.1.2
pfam HRGMv2_2474_2 HRGMv2_2474_2_39 47480 47986 + ATP-synt_B
pfam HRGMv2_2474_2 HRGMv2_2474_2_40 48001 48528 + OSCP
TC HRGMv2_2474_2 HRGMv2_2474_2_41 48594 50102 + 3.A.2.1.2
TC HRGMv2_2474_2 HRGMv2_2474_2_42 50114 50995 + 3.A.2.1.5
TC HRGMv2_2474_2 HRGMv2_2474_2_43 51055 52464 + 3.A.2.1.5
Gene ID: HRGMv2_2474_2_32
Type: TC
Location: 39521 - 41077 (+)
Gene ID: HRGMv2_2474_2_33
Type: TC
Location: 41243 - 42418 (+)
Gene ID: HRGMv2_2474_2_34
Type: TC
Location: 42476 - 43126 (+)
Gene ID: HRGMv2_2474_2_35
Type: TC
Location: 43146 - 45356 (+)
Gene ID: HRGMv2_2474_2_36
Type: CAZyme
Location: 45511 - 46287 (+)
Gene ID: HRGMv2_2474_2_37
Type: pfam
Location: 46483 - 46698 (+)
Gene ID: HRGMv2_2474_2_38
Type: TC
Location: 46753 - 47466 (+)
Gene ID: HRGMv2_2474_2_39
Type: pfam
Location: 47480 - 47986 (+)
Gene ID: HRGMv2_2474_2_40
Type: pfam
Location: 48001 - 48528 (+)
Gene ID: HRGMv2_2474_2_41
Type: TC
Location: 48594 - 50102 (+)
Gene ID: HRGMv2_2474_2_42
Type: TC
Location: 50114 - 50995 (+)
Gene ID: HRGMv2_2474_2_43
Type: TC
Location: 51055 - 52464 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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