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Cluster: HRGMv2_2474_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2474_16 HRGMv2_2474_16_10 14058 15056 + GT4
CAZyme HRGMv2_2474_16 HRGMv2_2474_16_11 15069 16403 + GT4
pfam HRGMv2_2474_16 HRGMv2_2474_16_12 16454 16678 + DUF1797
TC HRGMv2_2474_16 HRGMv2_2474_16_13 16704 17753 - 3.A.1.2.17
pfam HRGMv2_2474_16 HRGMv2_2474_16_14 17913 18662 - Cons_hypoth95 | MTS | Methyltransf_31
CAZyme HRGMv2_2474_16 HRGMv2_2474_16_15 18746 20689 - GH13_8
pfam HRGMv2_2474_16 HRGMv2_2474_16_16 20820 21968 - TGT
pfam HRGMv2_2474_16 HRGMv2_2474_16_17 22103 22837 + DUF975
TC HRGMv2_2474_16 HRGMv2_2474_16_18 22848 24026 - 2.A.1.46.5
Gene ID: HRGMv2_2474_16_10
Type: CAZyme
Location: 14058 - 15056 (+)
Gene ID: HRGMv2_2474_16_11
Type: CAZyme
Location: 15069 - 16403 (+)
Gene ID: HRGMv2_2474_16_12
Type: pfam
Location: 16454 - 16678 (+)
Gene ID: HRGMv2_2474_16_13
Type: TC
Location: 16704 - 17753 (-)
Gene ID: HRGMv2_2474_16_14
Type: pfam
Location: 17913 - 18662 (-)
Gene ID: HRGMv2_2474_16_15
Type: CAZyme
Location: 18746 - 20689 (-)
Gene ID: HRGMv2_2474_16_16
Type: pfam
Location: 20820 - 21968 (-)
Gene ID: HRGMv2_2474_16_17
Type: pfam
Location: 22103 - 22837 (+)
Gene ID: HRGMv2_2474_16_18
Type: TC
Location: 22848 - 24026 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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