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Cluster: HRGMv2_2474_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2474_11 HRGMv2_2474_11_22 25823 27751 - 4.A.2.1.8
STP HRGMv2_2474_11 HRGMv2_2474_11_23 27761 28693 - PfkB
TF HRGMv2_2474_11 HRGMv2_2474_11_24 28848 29597 + HTH_6
TC HRGMv2_2474_11 HRGMv2_2474_11_25 29637 30476 - 4.A.6.1.4
TC HRGMv2_2474_11 HRGMv2_2474_11_26 30466 31275 - 4.A.6.1.4
TC HRGMv2_2474_11 HRGMv2_2474_11_27 31428 31904 - 4.A.6.1.4
pfam HRGMv2_2474_11 HRGMv2_2474_11_28 31993 32268 - YajC
pfam HRGMv2_2474_11 HRGMv2_2474_11_29 32269 32691 - EIIA-man
CAZyme HRGMv2_2474_11 HRGMv2_2474_11_30 32833 33750 - CE9
Gene ID: HRGMv2_2474_11_22
Type: TC
Location: 25823 - 27751 (-)
Gene ID: HRGMv2_2474_11_23
Type: STP
Location: 27761 - 28693 (-)
Gene ID: HRGMv2_2474_11_24
Type: TF
Location: 28848 - 29597 (+)
Gene ID: HRGMv2_2474_11_25
Type: TC
Location: 29637 - 30476 (-)
Gene ID: HRGMv2_2474_11_26
Type: TC
Location: 30466 - 31275 (-)
Gene ID: HRGMv2_2474_11_27
Type: TC
Location: 31428 - 31904 (-)
Gene ID: HRGMv2_2474_11_28
Type: pfam
Location: 31993 - 32268 (-)
Gene ID: HRGMv2_2474_11_29
Type: pfam
Location: 32269 - 32691 (-)
Gene ID: HRGMv2_2474_11_30
Type: CAZyme
Location: 32833 - 33750 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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