dbCAN Logo

Cluster: HRGMv2_2474_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2474_11 HRGMv2_2474_11_2 477 2462 - 3.A.1.122.13
TF HRGMv2_2474_11 HRGMv2_2474_11_3 2551 3189 - MarR
TC HRGMv2_2474_11 HRGMv2_2474_11_4 3288 5006 - 3.A.1.129.1
TC HRGMv2_2474_11 HRGMv2_2474_11_5 5038 6744 - 3.A.1.129.1
TC HRGMv2_2474_11 HRGMv2_2474_11_6 6889 7884 - 3.D.4.3.2
TC HRGMv2_2474_11 HRGMv2_2474_11_7 7881 9332 - 3.D.4.3.2
CAZyme HRGMv2_2474_11 HRGMv2_2474_11_8 9540 11357 - GH13_39
CAZyme HRGMv2_2474_11 HRGMv2_2474_11_9 11457 13859 - GT35
CAZyme HRGMv2_2474_11 HRGMv2_2474_11_10 13931 15367 - GT5
Gene ID: HRGMv2_2474_11_2
Type: TC
Location: 477 - 2462 (-)
Gene ID: HRGMv2_2474_11_3
Type: TF
Location: 2551 - 3189 (-)
Gene ID: HRGMv2_2474_11_4
Type: TC
Location: 3288 - 5006 (-)
Gene ID: HRGMv2_2474_11_5
Type: TC
Location: 5038 - 6744 (-)
Gene ID: HRGMv2_2474_11_6
Type: TC
Location: 6889 - 7884 (-)
Gene ID: HRGMv2_2474_11_7
Type: TC
Location: 7881 - 9332 (-)
Gene ID: HRGMv2_2474_11_8
Type: CAZyme
Location: 9540 - 11357 (-)
Gene ID: HRGMv2_2474_11_9
Type: CAZyme
Location: 11457 - 13859 (-)
Gene ID: HRGMv2_2474_11_10
Type: CAZyme
Location: 13931 - 15367 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List