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Cluster: HRGMv2_2474_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2474_10 HRGMv2_2474_10_46 43687 44382 + 8.A.3.2.1
pfam HRGMv2_2474_10 HRGMv2_2474_10_47 44437 45201 + CpsB_CapC
TC HRGMv2_2474_10 HRGMv2_2474_10_48 45223 45909 + 9.B.18.1.2
pfam HRGMv2_2474_10 HRGMv2_2474_10_49 45913 46362 + Alg14
CAZyme HRGMv2_2474_10 HRGMv2_2474_10_50 46362 46868 + GT1
CAZyme HRGMv2_2474_10 HRGMv2_2474_10_51 46865 47581 + GT32
NULL(UNKNOWN) HRGMv2_2474_10 HRGMv2_2474_10_52 47578 48672 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2474_10 HRGMv2_2474_10_53 48672 49640 + GT2
Gene ID: HRGMv2_2474_10_46
Type: TC
Location: 43687 - 44382 (+)
Gene ID: HRGMv2_2474_10_47
Type: pfam
Location: 44437 - 45201 (+)
Gene ID: HRGMv2_2474_10_48
Type: TC
Location: 45223 - 45909 (+)
Gene ID: HRGMv2_2474_10_49
Type: pfam
Location: 45913 - 46362 (+)
Gene ID: HRGMv2_2474_10_50
Type: CAZyme
Location: 46362 - 46868 (+)
Gene ID: HRGMv2_2474_10_51
Type: CAZyme
Location: 46865 - 47581 (+)
Gene ID: HRGMv2_2474_10_52
Type:
Location: 47578 - 48672 (+)
Gene ID: HRGMv2_2474_10_53
Type: CAZyme
Location: 48672 - 49640 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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