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Cluster: HRGMv2_2474_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2474_3 HRGMv2_2474_3_128 125209 125589 + 1.A.22.1.8
TC HRGMv2_2474_3 HRGMv2_2474_3_129 125628 126905 - 2.A.66.1.34
pfam HRGMv2_2474_3 HRGMv2_2474_3_130 126952 127512 - KOW | NusG
pfam HRGMv2_2474_3 HRGMv2_2474_3_131 127621 127818 - SecE
TC HRGMv2_2474_3 HRGMv2_2474_3_132 128015 129850 - 9.B.97.5.1
CAZyme HRGMv2_2474_3 HRGMv2_2474_3_133 130021 132309 - GT51
pfam HRGMv2_2474_3 HRGMv2_2474_3_134 132385 133254 + PseudoU_synth_2
TC HRGMv2_2474_3 HRGMv2_2474_3_135 133340 134185 - 3.A.1.15.3
pfam HRGMv2_2474_3 HRGMv2_2474_3_136 134418 134858 - ComGF
pfam HRGMv2_2474_3 HRGMv2_2474_3_137 134839 135243 - ComGE
TC HRGMv2_2474_3 HRGMv2_2474_3_138 135495 135800 - 3.A.14.1.2
TC HRGMv2_2474_3 HRGMv2_2474_3_139 135819 136838 - 3.A.14.1.2
TC HRGMv2_2474_3 HRGMv2_2474_3_140 136777 137721 - 3.A.14.1.1
pfam HRGMv2_2474_3 HRGMv2_2474_3_141 137909 138085 - Ribosomal_S21
STP HRGMv2_2474_3 HRGMv2_2474_3_142 138208 139689 - CBS | CBS
CAZyme HRGMv2_2474_3 HRGMv2_2474_3_143 139858 141459 + GH25
Gene ID: HRGMv2_2474_3_128
Type: TC
Location: 125209 - 125589 (+)
Gene ID: HRGMv2_2474_3_129
Type: TC
Location: 125628 - 126905 (-)
Gene ID: HRGMv2_2474_3_130
Type: pfam
Location: 126952 - 127512 (-)
Gene ID: HRGMv2_2474_3_131
Type: pfam
Location: 127621 - 127818 (-)
Gene ID: HRGMv2_2474_3_132
Type: TC
Location: 128015 - 129850 (-)
Gene ID: HRGMv2_2474_3_133
Type: CAZyme
Location: 130021 - 132309 (-)
Gene ID: HRGMv2_2474_3_134
Type: pfam
Location: 132385 - 133254 (+)
Gene ID: HRGMv2_2474_3_135
Type: TC
Location: 133340 - 134185 (-)
Gene ID: HRGMv2_2474_3_136
Type: pfam
Location: 134418 - 134858 (-)
Gene ID: HRGMv2_2474_3_137
Type: pfam
Location: 134839 - 135243 (-)
Gene ID: HRGMv2_2474_3_138
Type: TC
Location: 135495 - 135800 (-)
Gene ID: HRGMv2_2474_3_139
Type: TC
Location: 135819 - 136838 (-)
Gene ID: HRGMv2_2474_3_140
Type: TC
Location: 136777 - 137721 (-)
Gene ID: HRGMv2_2474_3_141
Type: pfam
Location: 137909 - 138085 (-)
Gene ID: HRGMv2_2474_3_142
Type: STP
Location: 138208 - 139689 (-)
Gene ID: HRGMv2_2474_3_143
Type: CAZyme
Location: 139858 - 141459 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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