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Cluster: HRGMv2_2474_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2474_3 HRGMv2_2474_3_24 17227 19650 - GT51
pfam HRGMv2_2474_3 HRGMv2_2474_3_25 19787 21046 + tRNA-synt_1b | S4 | SYY_C-terminal
NULL(UNKNOWN) HRGMv2_2474_3 HRGMv2_2474_3_26 21171 21638 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2474_3 HRGMv2_2474_3_27 21718 23808 + 2.A.36.3.2
TC HRGMv2_2474_3 HRGMv2_2474_3_28 23833 25260 - 2.A.1.3.17
pfam HRGMv2_2474_3 HRGMv2_2474_3_29 25326 26546 - ThiI | THUMP | ThiI_fer
TC HRGMv2_2474_3 HRGMv2_2474_3_30 26636 27643 - 2.A.98.1.3
TC HRGMv2_2474_3 HRGMv2_2474_3_31 27803 29641 - 2.A.3.14.3
Gene ID: HRGMv2_2474_3_24
Type: CAZyme
Location: 17227 - 19650 (-)
Gene ID: HRGMv2_2474_3_25
Type: pfam
Location: 19787 - 21046 (+)
Gene ID: HRGMv2_2474_3_26
Type:
Location: 21171 - 21638 (+)
Gene ID: HRGMv2_2474_3_27
Type: TC
Location: 21718 - 23808 (+)
Gene ID: HRGMv2_2474_3_28
Type: TC
Location: 23833 - 25260 (-)
Gene ID: HRGMv2_2474_3_29
Type: pfam
Location: 25326 - 26546 (-)
Gene ID: HRGMv2_2474_3_30
Type: TC
Location: 26636 - 27643 (-)
Gene ID: HRGMv2_2474_3_31
Type: TC
Location: 27803 - 29641 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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