dbCAN Logo

Cluster: HRGMv2_2474_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2474_1 HRGMv2_2474_1_8 8956 10698 + GH13_31
pfam HRGMv2_2474_1 HRGMv2_2474_1_9 10860 11765 + 6PGD | NAD_binding_2
pfam HRGMv2_2474_1 HRGMv2_2474_1_10 11775 13271 + FGGY_N | FGGY_C
TC HRGMv2_2474_1 HRGMv2_2474_1_11 13288 14640 + 2.A.8.1.1
TC HRGMv2_2474_1 HRGMv2_2474_1_12 14677 16092 - 2.A.35.1.3
STP HRGMv2_2474_1 HRGMv2_2474_1_13 16721 17245 + Pribosyltran
TC HRGMv2_2474_1 HRGMv2_2474_1_14 17248 18534 + 2.A.40.1.2
pfam HRGMv2_2474_1 HRGMv2_2474_1_15 18635 19558 + OTCace | OTCace_N
peptidase HRGMv2_2474_1 HRGMv2_2474_1_16 19582 20652 + C26.UNW
TC HRGMv2_2474_1 HRGMv2_2474_1_17 20758 21306 + 3.A.1.25.2
Gene ID: HRGMv2_2474_1_8
Type: CAZyme
Location: 8956 - 10698 (+)
Gene ID: HRGMv2_2474_1_9
Type: pfam
Location: 10860 - 11765 (+)
Gene ID: HRGMv2_2474_1_10
Type: pfam
Location: 11775 - 13271 (+)
Gene ID: HRGMv2_2474_1_11
Type: TC
Location: 13288 - 14640 (+)
Gene ID: HRGMv2_2474_1_12
Type: TC
Location: 14677 - 16092 (-)
Gene ID: HRGMv2_2474_1_13
Type: STP
Location: 16721 - 17245 (+)
Gene ID: HRGMv2_2474_1_14
Type: TC
Location: 17248 - 18534 (+)
Gene ID: HRGMv2_2474_1_15
Type: pfam
Location: 18635 - 19558 (+)
Gene ID: HRGMv2_2474_1_16
Type: peptidase
Location: 19582 - 20652 (+)
Gene ID: HRGMv2_2474_1_17
Type: TC
Location: 20758 - 21306 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List