Cluster: HRGMv2_2464_CGC9
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2464
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2464_8 | HRGMv2_2464_8_47 | 43332 | 44285 | + | 3.A.1.131.1 |
| pfam | HRGMv2_2464_8 | HRGMv2_2464_8_48 | 44272 | 45048 | + | ABC2_membrane_2 | ABC2_membrane_4 |
| pfam | HRGMv2_2464_8 | HRGMv2_2464_8_49 | 45590 | 46354 | - | Ubie_methyltran | TehB | Methyltransf_11 | Methyltransf_25 | Methyltransf_31 |
| TC | HRGMv2_2464_8 | HRGMv2_2464_8_50 | 46535 | 47596 | - | 2.A.7.3.59 |
| NULL(UNKNOWN) | HRGMv2_2464_8 | HRGMv2_2464_8_51 | 47667 | 48041 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_2464_8 | HRGMv2_2464_8_52 | 48153 | 49715 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2464_8 | HRGMv2_2464_8_53 | 49712 | 50506 | - | 3.A.1.105.9 |
| TC | HRGMv2_2464_8 | HRGMv2_2464_8_54 | 50581 | 51705 | + | 2.A.86.1.8 |
| TC | HRGMv2_2464_8 | HRGMv2_2464_8_55 | 51857 | 53197 | + | 9.A.40.2.1 |
| TF | HRGMv2_2464_8 | HRGMv2_2464_8_56 | 53564 | 54277 | - | GntR |
| TC | HRGMv2_2464_8 | HRGMv2_2464_8_57 | 54402 | 56462 | + | 4.A.1.2.13 |
| CAZyme | HRGMv2_2464_8 | HRGMv2_2464_8_58 | 56535 | 58166 | + | GH13_29 |
Gene ID: HRGMv2_2464_8_47
Type: TC
Location: 43332 - 44285 (+)
Type: TC
Location: 43332 - 44285 (+)
Gene ID: HRGMv2_2464_8_48
Type: pfam
Location: 44272 - 45048 (+)
Type: pfam
Location: 44272 - 45048 (+)
Gene ID: HRGMv2_2464_8_49
Type: pfam
Location: 45590 - 46354 (-)
Type: pfam
Location: 45590 - 46354 (-)
Gene ID: HRGMv2_2464_8_50
Type: TC
Location: 46535 - 47596 (-)
Type: TC
Location: 46535 - 47596 (-)
Gene ID: HRGMv2_2464_8_51
Type:
Location: 47667 - 48041 (-)
Type:
Location: 47667 - 48041 (-)
Gene ID: HRGMv2_2464_8_52
Type:
Location: 48153 - 49715 (-)
Type:
Location: 48153 - 49715 (-)
Gene ID: HRGMv2_2464_8_53
Type: TC
Location: 49712 - 50506 (-)
Type: TC
Location: 49712 - 50506 (-)
Gene ID: HRGMv2_2464_8_54
Type: TC
Location: 50581 - 51705 (+)
Type: TC
Location: 50581 - 51705 (+)
Gene ID: HRGMv2_2464_8_55
Type: TC
Location: 51857 - 53197 (+)
Type: TC
Location: 51857 - 53197 (+)
Gene ID: HRGMv2_2464_8_56
Type: TF
Location: 53564 - 54277 (-)
Type: TF
Location: 53564 - 54277 (-)
Gene ID: HRGMv2_2464_8_57
Type: TC
Location: 54402 - 56462 (+)
Type: TC
Location: 54402 - 56462 (+)
Gene ID: HRGMv2_2464_8_58
Type: CAZyme
Location: 56535 - 58166 (+)
Type: CAZyme
Location: 56535 - 58166 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus sanguinis_H
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.