PROTEIN: HRGMv2_2464_8_52
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Protein File & Metadata
Source:
HRGMv2_2464_8_52.pdb
Genome ID:
Protein ID:
HRGMv2_2464_8_52
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Protein Sequence
MKQFSNTIFN LGYFLILTMT AIALLFLSGQ ILLSHTYIPL RISEGVQFVS NPWYFYPILL 60 LFLLSLFLIR PLLEKVQTKH LFLILSLIFI AAAIFLITAY DGRIRADAKH VFNAALAFNR 120 GDYSSLTTIG SYIYRNPHQL GLMTLERIYA FISPTTQFAF SMNVVWTLLS HFLIYKITAL 180 LNAREMIQKY TILLTFLFLP QLFFILFVYG TIPGLFFCLL SLYAFIKLDQ KGNLLYALLG 240 AASISLACLL RNNYIIFAIM LIGVYFLSIF YKWSWKKPLA IILILAGIVL SNKGLTAYYE 300 QLIGDKIGVG TPKIAYITMG LRDDPNRQTL GGWYDAYNTK ILKRNKYDEK LATEMATRDL 360 KDILIHFSKH PAYALKFFYE KVKSTWTEPT FQSIWTGPQI ERQQYMKPTI LRSIYEERKG 420 YQIVNFLLLT LLASIYLLSC FFILHKFFVA EEKLTPFDLY PFIFLLGGGL FHFFWETKSQ 480 YVYIYVLLLI PSAAQSLVDL SDWWKNKGKG EPKDQLEKDL 520
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q57W36-F1-model_v4 | 73 | 514 | 49 | 529 | 0.4588 |
0.6551 |
| AF-Q57W35-F1-model_v4 | 70 | 520 | 46 | 495 | 0.4553 |
0.6384 |
| AF-Q57W34-F1-model_v4 | 70 | 514 | 46 | 532 | 0.4548 |
0.6369 |
| AF-A4IB08-F1-model_v4 | 71 | 514 | 61 | 570 | 0.4464 |
0.6464 |
| AF-Q8IIK0-F1-model_v4 | 71 | 520 | 32 | 592 | 0.445 |
0.6343 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-K9RJ23-F1-model_v4 | GT39 | 73 | 508 | 5 | 474 | 0.6105 |
0.7308 |
| AF-A0A2K8SVL9-F1-model_v4 | GT39 | 73 | 508 | 1 | 467 | 0.6095 |
0.7256 |
| AF-A0A0K1NAU4-F1-model_v4 | GT39 | 2 | 505 | 1 | 436 | 0.6088 |
0.7018 |
| AF-Q2JNM3-F1-model_v4 | GT39 | 74 | 508 | 35 | 456 | 0.6054 |
0.7521 |
| AF-A0A1Z4ITN4-F1-model_v4 | GT39 | 73 | 508 | 1 | 498 | 0.5915 |
0.7238 |
| AF-A0A1Z4Q4K9-F1-model_v4 | GT39 | 73 | 508 | 1 | 499 | 0.5895 |
0.722 |
| AF-A0A143HQ03-F1-model_v4 | CBM51 | 71 | 509 | 26 | 446 | 0.5689 |
0.7635 |
| UDF05385.1 | GT0 | 72 | 509 | 29 | 469 | 0.5683 |
0.6865 |
| AF-A0A0A7EFI9-F1-model_v4 | GT83 | 70 | 501 | 1 | 354 | 0.5653 |
0.7827 |
| AF-A0A2Z3KSW4-F1-model_v4 | GT83 | 70 | 505 | 5 | 360 | 0.5611 |
0.7927 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WCO68223.1 | GT39 | 77 | 507 | 1 | 392 | 0.647 |
0.7867 |
| K4KGJ7 | GT39 | 67 | 511 | 17 | 434 | 0.6359 |
0.7644 |
| A0A068N2T7 | GT39 | 76 | 508 | 11 | 438 | 0.6244 |
0.7347 |
| E0UIR8 | GT39 | 76 | 508 | 28 | 441 | 0.6183 |
0.7521 |
| A0A0K1NAU4 | GT39 | 2 | 505 | 1 | 436 | 0.6088 |
0.7018 |
| Q2JNM3 | GT39 | 74 | 508 | 35 | 456 | 0.6054 |
0.7521 |
| A0A3Q9J410 | GT39 | 68 | 520 | 22 | 517 | 0.5782 |
0.7024 |
| Q1ISV9 | GT2 | 74 | 518 | 21 | 440 | 0.5723 |
0.7995 |
| A0A7H8H794 | GT2 | 72 | 520 | 1 | 640 | 0.5707 |
0.7666 |
| UQN31035.1 | GT39 | 76 | 510 | 85 | 535 | 0.5697 |
0.7191 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.