Cluster: HRGMv2_2460_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2460
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2460_10 | HRGMv2_2460_10_6 | 6874 | 8382 | - | GT4 |
| TC | HRGMv2_2460_10 | HRGMv2_2460_10_7 | 8395 | 10770 | - | 3.A.5.10.1 |
| pfam | HRGMv2_2460_10 | HRGMv2_2460_10_8 | 10763 | 11209 | - | Sec-ASP3 |
| TC | HRGMv2_2460_10 | HRGMv2_2460_10_9 | 11212 | 12750 | - | 3.A.5.10.1 |
| TC | HRGMv2_2460_10 | HRGMv2_2460_10_10 | 12737 | 14308 | - | 3.A.5.10.1 |
| TC | HRGMv2_2460_10 | HRGMv2_2460_10_11 | 14409 | 15635 | - | 3.A.5.10.1 |
| CAZyme | HRGMv2_2460_10 | HRGMv2_2460_10_12 | 15731 | 17824 | - | GT2 | GT8 |
Gene ID: HRGMv2_2460_10_6
Type: CAZyme
Location: 6874 - 8382 (-)
Type: CAZyme
Location: 6874 - 8382 (-)
Gene ID: HRGMv2_2460_10_7
Type: TC
Location: 8395 - 10770 (-)
Type: TC
Location: 8395 - 10770 (-)
Gene ID: HRGMv2_2460_10_8
Type: pfam
Location: 10763 - 11209 (-)
Type: pfam
Location: 10763 - 11209 (-)
Gene ID: HRGMv2_2460_10_9
Type: TC
Location: 11212 - 12750 (-)
Type: TC
Location: 11212 - 12750 (-)
Gene ID: HRGMv2_2460_10_10
Type: TC
Location: 12737 - 14308 (-)
Type: TC
Location: 12737 - 14308 (-)
Gene ID: HRGMv2_2460_10_11
Type: TC
Location: 14409 - 15635 (-)
Type: TC
Location: 14409 - 15635 (-)
Gene ID: HRGMv2_2460_10_12
Type: CAZyme
Location: 15731 - 17824 (-)
Type: CAZyme
Location: 15731 - 17824 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2460_10_11 | vegan > omnivore | 2.26723 | 0.01924 |