Cluster: HRGMv2_2460_CGC27
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2460
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2460_69 | HRGMv2_2460_69_3 | 2571 | 3263 | + | 8.A.3.2.3 |
| TC | HRGMv2_2460_69 | HRGMv2_2460_69_4 | 3273 | 4013 | + | 8.A.3.2.3 |
| TC | HRGMv2_2460_69 | HRGMv2_2460_69_5 | 4069 | 5436 | + | 9.B.18.1.2 |
| CAZyme | HRGMv2_2460_69 | HRGMv2_2460_69_6 | 5469 | 6641 | + | GT4 |
| CAZyme | HRGMv2_2460_69 | HRGMv2_2460_69_7 | 6644 | 7789 | + | GT4 |
| pfam | HRGMv2_2460_69 | HRGMv2_2460_69_8 | 7824 | 8465 | + | DUF1919 |
| pfam | HRGMv2_2460_69 | HRGMv2_2460_69_9 | 8462 | 9427 | + | DUF6625 |
| CAZyme | HRGMv2_2460_69 | HRGMv2_2460_69_10 | 9427 | 10194 | + | GT2 |
Gene ID: HRGMv2_2460_69_3
Type: TC
Location: 2571 - 3263 (+)
Type: TC
Location: 2571 - 3263 (+)
Gene ID: HRGMv2_2460_69_4
Type: TC
Location: 3273 - 4013 (+)
Type: TC
Location: 3273 - 4013 (+)
Gene ID: HRGMv2_2460_69_5
Type: TC
Location: 4069 - 5436 (+)
Type: TC
Location: 4069 - 5436 (+)
Gene ID: HRGMv2_2460_69_6
Type: CAZyme
Location: 5469 - 6641 (+)
Type: CAZyme
Location: 5469 - 6641 (+)
Gene ID: HRGMv2_2460_69_7
Type: CAZyme
Location: 6644 - 7789 (+)
Type: CAZyme
Location: 6644 - 7789 (+)
Gene ID: HRGMv2_2460_69_8
Type: pfam
Location: 7824 - 8465 (+)
Type: pfam
Location: 7824 - 8465 (+)
Gene ID: HRGMv2_2460_69_9
Type: pfam
Location: 8462 - 9427 (+)
Type: pfam
Location: 8462 - 9427 (+)
Gene ID: HRGMv2_2460_69_10
Type: CAZyme
Location: 9427 - 10194 (+)
Type: CAZyme
Location: 9427 - 10194 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.