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Cluster: HRGMv2_2459_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2459_1 HRGMv2_2459_1_116 116190 118481 + GT51
peptidase HRGMv2_2459_1 HRGMv2_2459_1_117 118590 119927 - C01.UPB
TC HRGMv2_2459_1 HRGMv2_2459_1_118 120030 120473 - 9.B.124.1.4
pfam HRGMv2_2459_1 HRGMv2_2459_1_119 120490 121311 - NAD_synthase
pfam HRGMv2_2459_1 HRGMv2_2459_1_120 121323 122777 - NAPRTase | NAPRTase_N | NAPRTase_C
TC HRGMv2_2459_1 HRGMv2_2459_1_121 122958 124259 - 3.A.1.122.13
TC HRGMv2_2459_1 HRGMv2_2459_1_122 124228 124911 - 3.A.1.122.7
Gene ID: HRGMv2_2459_1_116
Type: CAZyme
Location: 116190 - 118481 (+)
Gene ID: HRGMv2_2459_1_117
Type: peptidase
Location: 118590 - 119927 (-)
Gene ID: HRGMv2_2459_1_118
Type: TC
Location: 120030 - 120473 (-)
Gene ID: HRGMv2_2459_1_119
Type: pfam
Location: 120490 - 121311 (-)
Gene ID: HRGMv2_2459_1_120
Type: pfam
Location: 121323 - 122777 (-)
Gene ID: HRGMv2_2459_1_121
Type: TC
Location: 122958 - 124259 (-)
Gene ID: HRGMv2_2459_1_122
Type: TC
Location: 124228 - 124911 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2459_1_121 vegan > omnivore 1.32188 0.01710
HRGMv2_2459_1_122 vegan > omnivore 1.18205 0.01710

🧭 Explore Read Mapping of CGC

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