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Cluster: HRGMv2_2459_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2459_10 HRGMv2_2459_10_63 62788 65028 - 3.A.11.1.2
TC HRGMv2_2459_10 HRGMv2_2459_10_64 65018 65713 - 3.A.11.1.1
pfam HRGMv2_2459_10 HRGMv2_2459_10_65 65821 66576 - Acyltransferase
CAZyme HRGMv2_2459_10 HRGMv2_2459_10_66 66679 67650 + CE4
pfam HRGMv2_2459_10 HRGMv2_2459_10_67 67700 68464 + UPF0020 | Cons_hypoth95 | MTS
pfam HRGMv2_2459_10 HRGMv2_2459_10_68 68468 68737 + GIY-YIG | T5orf172
TC HRGMv2_2459_10 HRGMv2_2459_10_69 68794 70380 - 3.A.18.1.1
TC HRGMv2_2459_10 HRGMv2_2459_10_70 70575 71480 - 1.A.35.3.4
pfam HRGMv2_2459_10 HRGMv2_2459_10_71 71493 71873 - bPH_1 | bPH_3
TC HRGMv2_2459_10 HRGMv2_2459_10_72 72178 72753 + 2.A.88.3.3
Gene ID: HRGMv2_2459_10_63
Type: TC
Location: 62788 - 65028 (-)
Gene ID: HRGMv2_2459_10_64
Type: TC
Location: 65018 - 65713 (-)
Gene ID: HRGMv2_2459_10_65
Type: pfam
Location: 65821 - 66576 (-)
Gene ID: HRGMv2_2459_10_66
Type: CAZyme
Location: 66679 - 67650 (+)
Gene ID: HRGMv2_2459_10_67
Type: pfam
Location: 67700 - 68464 (+)
Gene ID: HRGMv2_2459_10_68
Type: pfam
Location: 68468 - 68737 (+)
Gene ID: HRGMv2_2459_10_69
Type: TC
Location: 68794 - 70380 (-)
Gene ID: HRGMv2_2459_10_70
Type: TC
Location: 70575 - 71480 (-)
Gene ID: HRGMv2_2459_10_71
Type: pfam
Location: 71493 - 71873 (-)
Gene ID: HRGMv2_2459_10_72
Type: TC
Location: 72178 - 72753 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2459_10_68 vegan > omnivore 1.63437 0.01710
HRGMv2_2459_10_68 vegetarian > omnivore 2.08004 0.03320

🧭 Explore Read Mapping of CGC

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