Cluster: HRGMv2_2455_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2455
- CGC Family ID: CGCFAM_01803
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2455_1 | HRGMv2_2455_1_91 | 104068 | 106494 | - | GH94 |
| TF | HRGMv2_2455_1 | HRGMv2_2455_1_92 | 106822 | 107853 | + | LacI |
| NULL(UNKNOWN) | HRGMv2_2455_1 | HRGMv2_2455_1_93 | 107874 | 109355 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2455_1 | HRGMv2_2455_1_94 | 109581 | 110567 | + | 3.A.1.1.23 |
| TC | HRGMv2_2455_1 | HRGMv2_2455_1_95 | 110560 | 111432 | + | 3.A.1.1.36 |
| TC | HRGMv2_2455_1 | HRGMv2_2455_1_96 | 111925 | 112977 | + | 9.A.23.1.1 |
Gene ID: HRGMv2_2455_1_91
Type: CAZyme
Location: 104068 - 106494 (-)
Type: CAZyme
Location: 104068 - 106494 (-)
Gene ID: HRGMv2_2455_1_92
Type: TF
Location: 106822 - 107853 (+)
Type: TF
Location: 106822 - 107853 (+)
Gene ID: HRGMv2_2455_1_93
Type:
Location: 107874 - 109355 (+)
Type:
Location: 107874 - 109355 (+)
Gene ID: HRGMv2_2455_1_94
Type: TC
Location: 109581 - 110567 (+)
Type: TC
Location: 109581 - 110567 (+)
Gene ID: HRGMv2_2455_1_95
Type: TC
Location: 110560 - 111432 (+)
Type: TC
Location: 110560 - 111432 (+)
Gene ID: HRGMv2_2455_1_96
Type: TC
Location: 111925 - 112977 (+)
Type: TC
Location: 111925 - 112977 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA11957
Species
UBA11957 sp019420465
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.