PROTEIN: HRGMv2_2455_1_93
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Protein File & Metadata
Source:
HRGMv2_2455_1_93.pdb
Genome ID:
Protein ID:
HRGMv2_2455_1_93
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Protein Sequence
MKKRSVLAMA LASAMVFSMT ACGGSGSTAS EAPAADSGSS APAEAAASAA PESSATDEAS 60 AASETSETSA AGEDAIPENE ISGDPSKADS FVVWAWNTDF VTLEDLLVQK YPELKDRLVF 120 VNCGGSNYYQ DKIDALLNDP SNELYPDMML LEVGYVQKYV QSDYLMSLSD LGITDADVKD 180 QFEYNIALGS DANGAQKASF WQATPGCIQV RADLAEKYLG TTDQAELEKT FSSWDSILEA 240 AKKVNDASGG KVKLFSGYDD LKYIYLNGAR KVGWYDDNDV IQMDDAMAEY MDYAKELYDQ 300 DLTFNTTMWG TDWAALKDGD GENSEACIAF AGCPWYTYWC LTDTWDKNTI LVDAPVQFYW 360 GGTGLAATAE CSDKDVAAEI IKACTCDAEF MTDIYKANGD FVNNQSAIKD IVANDVKGTS 420 TFSLYGDQNI PEFFSTRGQG VDVSLVKAED MTINESLFPA AVTSYATGEV DKDTAIKNFK 480 DSVHDTYSYL KVE 493
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A133CPC5-F1-model_v4 | 87 | 492 | 34 | 423 | 0.703 |
0.8302 |
| AF-K0F002-F1-model_v4 | 88 | 490 | 47 | 439 | 0.7016 |
0.8369 |
| AF-P71619-F1-model_v4 | 85 | 491 | 33 | 428 | 0.6939 |
0.8204 |
| AF-K0F2E6-F1-model_v4 | 1 | 491 | 27 | 436 | 0.6914 |
0.7977 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A9Q8PNJ5 | GH4 | 9 | 490 | 107 | 866 | 0.5566 |
0.7283 |
| AF-A0A1Q2TKJ3-F1-model_v4 | GH49 | 11 | 490 | 40 | 797 | 0.5412 |
0.69 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A9Q8PNJ5 | GH4 | 9 | 490 | 107 | 866 | 0.5566 |
0.7283 |
| A0A1Q2TKJ3 | GH49 | 11 | 490 | 40 | 797 | 0.5412 |
0.69 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5ixp-assembly1.cif.gz_A | 88 | 488 | 1 | 393 | 0.7876 |
0.8882 |
| 3uor-assembly2.cif.gz_B | 89 | 492 | 1 | 389 | 0.7423 |
0.8497 |
| 7c0x-assembly2.cif.gz_B | 80 | 490 | 6 | 395 | 0.7358 |
0.8405 |
| 7c0k-assembly1.cif.gz_A | 80 | 490 | 7 | 396 | 0.7356 |
0.8412 |
| 7c0s-assembly1.cif.gz_A | 81 | 490 | 7 | 396 | 0.7354 |
0.841 |
| 7c0t-assembly2.cif.gz_B | 81 | 490 | 7 | 396 | 0.735 |
0.8406 |
| 7c0o-assembly2.cif.gz_B | 81 | 490 | 7 | 397 | 0.7349 |
0.8397 |
| 7c19-assembly2.cif.gz_B | 80 | 491 | 7 | 396 | 0.7349 |
0.8405 |
| 7c0w-assembly1.cif.gz_A | 80 | 491 | 7 | 396 | 0.7346 |
0.8403 |
| 7c15-assembly2.cif.gz_B | 80 | 491 | 6 | 394 | 0.7345 |
0.8398 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P94528-F1-model_v4 | 83 | 489 | 28 | 433 | 0.7333 |
0.8428 |
| AF-O31518-F1-model_v4 | 88 | 490 | 33 | 427 | 0.674 |
0.7923 |
| AF-Q7LYW7-F1-model_v4 | 88 | 491 | 44 | 450 | 0.6703 |
0.7907 |
| AF-O58969-F1-model_v4 | 87 | 491 | 40 | 434 | 0.6341 |
0.7569 |
| AF-D4GP35-F1-model_v4 | 10 | 491 | 10 | 459 | 0.6324 |
0.6832 |
| AF-O06875-F1-model_v4 | 87 | 490 | 29 | 421 | 0.6309 |
0.7415 |
| AF-Q8YCE2-F1-model_v4 | 87 | 490 | 29 | 421 | 0.6309 |
0.7414 |
| AF-Q8FVX5-F1-model_v4 | 87 | 490 | 29 | 421 | 0.6303 |
0.7408 |
| AF-Q9V297-F1-model_v4 | 88 | 490 | 77 | 453 | 0.6104 |
0.7691 |