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Cluster: HRGMv2_2452_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2452_16 HRGMv2_2452_16_5 3784 6321 + GT51
pfam HRGMv2_2452_16 HRGMv2_2452_16_6 6353 6709 - SpoVAC_SpoVAEB
TC HRGMv2_2452_16 HRGMv2_2452_16_7 6711 7724 - 9.A.11.1.1
TC HRGMv2_2452_16 HRGMv2_2452_16_8 7721 8194 - 9.A.11.1.1
TC HRGMv2_2452_16 HRGMv2_2452_16_9 8211 8627 - 9.A.11.1.1
TC HRGMv2_2452_16 HRGMv2_2452_16_10 8617 9237 - 9.A.11.1.1
TF HRGMv2_2452_16 HRGMv2_2452_16_11 9360 9893 + 0041905
pfam HRGMv2_2452_16 HRGMv2_2452_16_12 9894 10496 - MMR_HSR1 | FeoB_N
CAZyme HRGMv2_2452_16 HRGMv2_2452_16_13 10554 11324 - CE4
pfam HRGMv2_2452_16 HRGMv2_2452_16_14 11511 13628 - Gln-synt_C | GSIII_N | Gln-synt_C-ter
NULL(UNKNOWN) HRGMv2_2452_16 HRGMv2_2452_16_15 13828 15714 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2452_16 HRGMv2_2452_16_16 15735 16367 - 3.A.1.32.2
TC HRGMv2_2452_16 HRGMv2_2452_16_17 16361 17914 - 3.A.1.32.2
NULL(UNKNOWN) HRGMv2_2452_16 HRGMv2_2452_16_18 17901 18737 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2452_16 HRGMv2_2452_16_19 18738 19535 - DUF4430
CAZyme HRGMv2_2452_16 HRGMv2_2452_16_20 19910 20683 - CE4
CAZyme HRGMv2_2452_16 HRGMv2_2452_16_21 20786 21898 - CE9
Gene ID: HRGMv2_2452_16_5
Type: CAZyme
Location: 3784 - 6321 (+)
Gene ID: HRGMv2_2452_16_6
Type: pfam
Location: 6353 - 6709 (-)
Gene ID: HRGMv2_2452_16_7
Type: TC
Location: 6711 - 7724 (-)
Gene ID: HRGMv2_2452_16_8
Type: TC
Location: 7721 - 8194 (-)
Gene ID: HRGMv2_2452_16_9
Type: TC
Location: 8211 - 8627 (-)
Gene ID: HRGMv2_2452_16_10
Type: TC
Location: 8617 - 9237 (-)
Gene ID: HRGMv2_2452_16_11
Type: TF
Location: 9360 - 9893 (+)
Gene ID: HRGMv2_2452_16_12
Type: pfam
Location: 9894 - 10496 (-)
Gene ID: HRGMv2_2452_16_13
Type: CAZyme
Location: 10554 - 11324 (-)
Gene ID: HRGMv2_2452_16_14
Type: pfam
Location: 11511 - 13628 (-)
Gene ID: HRGMv2_2452_16_15
Type:
Location: 13828 - 15714 (-)
Gene ID: HRGMv2_2452_16_16
Type: TC
Location: 15735 - 16367 (-)
Gene ID: HRGMv2_2452_16_17
Type: TC
Location: 16361 - 17914 (-)
Gene ID: HRGMv2_2452_16_18
Type:
Location: 17901 - 18737 (-)
Gene ID: HRGMv2_2452_16_19
Type: pfam
Location: 18738 - 19535 (-)
Gene ID: HRGMv2_2452_16_20
Type: CAZyme
Location: 19910 - 20683 (-)
Gene ID: HRGMv2_2452_16_21
Type: CAZyme
Location: 20786 - 21898 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Anaerostipes
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2452_16_5 vegan > omnivore 1.91697 0.00454
HRGMv2_2452_16_6 vegan > omnivore 2.09843 0.00454
HRGMv2_2452_16_8 vegan > omnivore 4.12181 0.00454
HRGMv2_2452_16_9 vegan > omnivore 1.65512 0.00454
HRGMv2_2452_16_10 vegan > omnivore 1.58331 0.00454
HRGMv2_2452_16_16 vegan > omnivore 1.91314 0.00454
HRGMv2_2452_16_20 vegan > omnivore 1.70549 0.00454
HRGMv2_2452_16_21 vegan > omnivore 1.33248 0.00454

🧭 Explore Read Mapping of CGC

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