PROTEIN: HRGMv2_2452_16_15
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Protein File & Metadata
Source:
HRGMv2_2452_16_15.pdb
Genome ID:
Protein ID:
HRGMv2_2452_16_15
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Protein Sequence
MRTMKRVAAF AMTVAVMMTS GVTTKAAVTN VQPTKDVSET NLKWANQIST GYDTLSEIKL 60 VGKYVYAADD SQHRIIKINK DTGKIEKQHK YYDESYSQYY VGNIAYGDGK VYVAYANKLE 120 KGEDGETNTV ANGRIEAFDA DTLEPVWISE AASHTEEDSE TGKTKTVYDM VASRLFYDNG 180 HLYYGTGTGT PGSSYGWDKT GKYYVLDTVD EDKNKTDEIK EIKEITSSSD EGNFYLKNGV 240 KVGNYIVASD TKGKIFTIDT KTSKVAATKE FGEVFSGNMA YDKTTNTIYF VVGTNDLYGI 300 KINSDGSFGK ENHVRVYKTG YSAMTPEVCN GKVYLSGSKG TSGVDGNGYF AVVDVRTNNY 360 KVNYTVDLPA YSQGEMLVAK TGTDSVRLYF TVNYAKTDDN YNPLSGGGIY SIEDKEGAKS 420 AKLETVYEPE QKYANYCLSS ISVDENGTMY YSNDSRTIFA VAKQPITKTQ TTTRSVKLTW 480 KKNKSAKGYV IYAKAGKGKY KKLTTVGKTT KKTVKVNAGT SYKFKVKPYT YTKKKGKKVT 540 KYYKTYAAKA KNGSKTVKIT YKNVKGYTSY RIDMKVGNSS YKKVMTSKKT GTLTLTYTQK 600 NAKVGKSYKF RLVGIKKVNG KDVEKTIK 628
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9HXJ7-F1-model_v4 | 35 | 464 | 36 | 380 | 0.618 |
0.849 |
| AF-Q57W14-F1-model_v4 | 4 | 463 | 58 | 419 | 0.6165 |
0.855 |
| AF-Q8N136-F1-model_v4 | 10 | 462 | 6 | 415 | 0.6154 |
0.7567 |
| AF-A0A077Z636-F1-model_v4 | 40 | 623 | 51 | 396 | 0.615 |
0.8629 |
| AF-Q1LV15-F1-model_v4 | 8 | 462 | 4 | 415 | 0.6122 |
0.7497 |
| AF-M9NE98-F1-model_v4 | 40 | 619 | 76 | 445 | 0.5632 |
0.791 |
| AF-A0A0G2L107-F1-model_v4 | 34 | 628 | 25 | 416 | 0.5333 |
0.7074 |
| AF-Q93794-F1-model_v4 | 2 | 628 | 128 | 587 | 0.5281 |
0.6946 |
| AF-A0A0N4U1B6-F1-model_v4 | 2 | 626 | 137 | 568 | 0.5087 |
0.6969 |
| AF-A0A0D2E3N7-F1-model_v4 | 2 | 608 | 16 | 435 | 0.5005 |
0.6663 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A7H8PZ23-F1-model_v4 | CBM32 | 14 | 468 | 47 | 570 | 0.4995 |
0.7607 |
| AF-A0A5B8V8R9-F1-model_v4 | CBM32 | 3 | 550 | 14 | 968 | 0.4903 |
0.7177 |
| AF-A0A518DPD7-F1-model_v4 | GH5 | 1 | 563 | 217 | 728 | 0.4414 |
0.5919 |
| AF-A0A6I6JV18-F1-model_v4 | CBM57 | 9 | 593 | 591 | 1148 | 0.3795 |
0.5626 |
| A0A9Q8Z8A1 | GH94 | 33 | 473 | 23 | 515 | 0.3191 |
0.6496 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A6F8YXI1 | CBM2 | 11 | 579 | 29 | 536 | 0.545 |
0.6885 |
| A0A7H8PZ23 | CBM32 | 14 | 468 | 47 | 570 | 0.4995 |
0.7607 |
| WJK48174.1 | CBM32 | 10 | 617 | 14 | 767 | 0.4784 |
0.6613 |
| A0A7L5ABW4 | CBM57 | 21 | 616 | 5 | 1553 | 0.4565 |
0.7006 |
| A0A3S6ZB64 | GT39 | 12 | 563 | 457 | 861 | 0.4428 |
0.7758 |
| A0A518DPD7 | GH5 | 1 | 563 | 217 | 728 | 0.4414 |
0.5919 |
| G8TS89 | GT39 | 12 | 419 | 479 | 881 | 0.4057 |
0.7233 |
| A0A6I6JV18 | CBM57 | 9 | 593 | 591 | 1148 | 0.3795 |
0.5626 |
| A0A7R8X6P4 | GT58 | 2 | 542 | 191 | 2065 | 0.3203 |
0.5617 |
| A0A9Q8Z8A1 | GH94 | 33 | 473 | 23 | 515 | 0.3191 |
0.6496 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5nnz-assembly2.cif.gz_B | 34 | 462 | 1 | 335 | 0.6803 |
0.8941 |
| 6y7o-assembly2.cif.gz_B | 42 | 566 | 1 | 318 | 0.6786 |
0.9081 |
| 6g6n-assembly3.cif.gz_C | 42 | 566 | 1 | 318 | 0.6782 |
0.9076 |
| 6lys-assembly1.cif.gz_B | 35 | 462 | 12 | 351 | 0.6668 |
0.8882 |
| 4imm-assembly2.cif.gz_B | 35 | 627 | 1 | 322 | 0.6662 |
0.8878 |
| 6g6o-assembly3.cif.gz_C | 40 | 463 | 1 | 318 | 0.6662 |
0.8923 |
| 3q7m-assembly1.cif.gz_A | 35 | 463 | 10 | 344 | 0.6653 |
0.8881 |
| 7tt1-assembly1.cif.gz_B | 35 | 461 | 10 | 349 | 0.665 |
0.8827 |
| 7tt4-assembly1.cif.gz_B | 36 | 461 | 11 | 350 | 0.6625 |
0.8809 |
| 3q7n-assembly1.cif.gz_A | 35 | 463 | 11 | 355 | 0.662 |
0.8755 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q86TI4-F1-model_v4 | 36 | 620 | 1 | 352 | 0.6367 |
0.8542 |
| AF-C7R5S3-F1-model_v4 | 35 | 627 | 37 | 388 | 0.635 |
0.8671 |
| AF-Q0A984-F1-model_v4 | 35 | 567 | 37 | 383 | 0.6332 |
0.87 |
| AF-Q8EC35-F1-model_v4 | 36 | 464 | 39 | 395 | 0.627 |
0.8536 |
| AF-Q63UT0-F1-model_v4 | 35 | 566 | 40 | 381 | 0.6223 |
0.8641 |
| AF-Q5X521-F1-model_v4 | 36 | 566 | 41 | 384 | 0.6207 |
0.8609 |
| AF-Q9HXJ7-F1-model_v4 | 35 | 464 | 36 | 380 | 0.618 |
0.849 |
| AF-Q3Y8L7-F1-model_v4 | 3 | 581 | 60 | 444 | 0.6177 |
0.8351 |
| AF-Q4R8E7-F1-model_v4 | 10 | 462 | 6 | 415 | 0.6174 |
0.7588 |
| AF-Q5BK30-F1-model_v4 | 10 | 462 | 6 | 415 | 0.6159 |
0.7572 |