Cluster: HRGMv2_2451_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2451
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2451_2 | HRGMv2_2451_2_149 | 136871 | 138367 | - | GH77 |
| TC | HRGMv2_2451_2 | HRGMv2_2451_2_150 | 138707 | 139969 | + | 2.A.49.9.2 |
| pfam | HRGMv2_2451_2 | HRGMv2_2451_2_151 | 140030 | 142117 | - | PP_kinase | PP_kinase_N | PP_kinase_C | PLDc_2 | PP_kinase_C_1 |
| TC | HRGMv2_2451_2 | HRGMv2_2451_2_152 | 142137 | 143051 | - | 1.A.35.3.2 |
| STP | HRGMv2_2451_2 | HRGMv2_2451_2_153 | 143092 | 143937 | - | LysR_substrate |
| TC | HRGMv2_2451_2 | HRGMv2_2451_2_154 | 143930 | 145657 | - | 2.A.58.2.2 |
Gene ID: HRGMv2_2451_2_149
Type: CAZyme
Location: 136871 - 138367 (-)
Type: CAZyme
Location: 136871 - 138367 (-)
Gene ID: HRGMv2_2451_2_150
Type: TC
Location: 138707 - 139969 (+)
Type: TC
Location: 138707 - 139969 (+)
Gene ID: HRGMv2_2451_2_151
Type: pfam
Location: 140030 - 142117 (-)
Type: pfam
Location: 140030 - 142117 (-)
Gene ID: HRGMv2_2451_2_152
Type: TC
Location: 142137 - 143051 (-)
Type: TC
Location: 142137 - 143051 (-)
Gene ID: HRGMv2_2451_2_153
Type: STP
Location: 143092 - 143937 (-)
Type: STP
Location: 143092 - 143937 (-)
Gene ID: HRGMv2_2451_2_154
Type: TC
Location: 143930 - 145657 (-)
Type: TC
Location: 143930 - 145657 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.