Cluster: HRGMv2_2451_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2451
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2451_2 | HRGMv2_2451_2_74 | 60442 | 61134 | + | 3.A.1.132.6 |
| NULL(UNKNOWN) | HRGMv2_2451_2 | HRGMv2_2451_2_75 | 61128 | 61955 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2451_2 | HRGMv2_2451_2_76 | 62015 | 64681 | - | CBM61 | GH53 |
| pfam | HRGMv2_2451_2 | HRGMv2_2451_2_77 | 64980 | 65879 | + | PseudoU_synth_2 |
| pfam | HRGMv2_2451_2 | HRGMv2_2451_2_78 | 65953 | 66492 | - | DUF5662 |
| CAZyme | HRGMv2_2451_2 | HRGMv2_2451_2_79 | 66503 | 68425 | - | GH13_11 |
Gene ID: HRGMv2_2451_2_74
Type: TC
Location: 60442 - 61134 (+)
Type: TC
Location: 60442 - 61134 (+)
Gene ID: HRGMv2_2451_2_75
Type:
Location: 61128 - 61955 (+)
Type:
Location: 61128 - 61955 (+)
Gene ID: HRGMv2_2451_2_76
Type: CAZyme
Location: 62015 - 64681 (-)
Type: CAZyme
Location: 62015 - 64681 (-)
Gene ID: HRGMv2_2451_2_77
Type: pfam
Location: 64980 - 65879 (+)
Type: pfam
Location: 64980 - 65879 (+)
Gene ID: HRGMv2_2451_2_78
Type: pfam
Location: 65953 - 66492 (-)
Type: pfam
Location: 65953 - 66492 (-)
Gene ID: HRGMv2_2451_2_79
Type: CAZyme
Location: 66503 - 68425 (-)
Type: CAZyme
Location: 66503 - 68425 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.