Cluster: HRGMv2_2451_CGC37
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2451
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2451_59 | HRGMv2_2451_59_2 | 1749 | 3125 | - | 2.A.66.1.33 |
| NULL(UNKNOWN) | HRGMv2_2451_59 | HRGMv2_2451_59_3 | 3085 | 3180 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2451_59 | HRGMv2_2451_59_4 | 3177 | 4118 | - | GH113 |
| TF | HRGMv2_2451_59 | HRGMv2_2451_59_5 | 4271 | 5164 | + | HTH_AraC | HTH_AraC |
| TC | HRGMv2_2451_59 | HRGMv2_2451_59_6 | 5220 | 5801 | - | 3.A.1.25.2 |
| CAZyme | HRGMv2_2451_59 | HRGMv2_2451_59_7 | 6041 | 8464 | + | CBM35 | CE12 | CE12 |
Gene ID: HRGMv2_2451_59_2
Type: TC
Location: 1749 - 3125 (-)
Type: TC
Location: 1749 - 3125 (-)
Gene ID: HRGMv2_2451_59_3
Type:
Location: 3085 - 3180 (-)
Type:
Location: 3085 - 3180 (-)
Gene ID: HRGMv2_2451_59_4
Type: CAZyme
Location: 3177 - 4118 (-)
Type: CAZyme
Location: 3177 - 4118 (-)
Gene ID: HRGMv2_2451_59_5
Type: TF
Location: 4271 - 5164 (+)
Type: TF
Location: 4271 - 5164 (+)
Gene ID: HRGMv2_2451_59_6
Type: TC
Location: 5220 - 5801 (-)
Type: TC
Location: 5220 - 5801 (-)
Gene ID: HRGMv2_2451_59_7
Type: CAZyme
Location: 6041 - 8464 (+)
Type: CAZyme
Location: 6041 - 8464 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.