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Cluster: HRGMv2_2451_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2451_32 HRGMv2_2451_32_1 2 3115 - CBM23 | GH5_8 | GH5_8
NULL(UNKNOWN) HRGMv2_2451_32 HRGMv2_2451_32_2 3576 4100 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_2451_32 HRGMv2_2451_32_3 4296 4775 + MarR
TC HRGMv2_2451_32 HRGMv2_2451_32_4 4809 6575 + 3.A.1.135.5
TC HRGMv2_2451_32 HRGMv2_2451_32_5 6560 8440 + 3.A.1.135.5
pfam HRGMv2_2451_32 HRGMv2_2451_32_6 8517 9701 - DUF4932
NULL(UNKNOWN) HRGMv2_2451_32 HRGMv2_2451_32_7 9955 10143 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2451_32 HRGMv2_2451_32_8 10626 15350 + CBM23 | CBM27 | GH26
Gene ID: HRGMv2_2451_32_1
Type: CAZyme
Location: 2 - 3115 (-)
Gene ID: HRGMv2_2451_32_2
Type:
Location: 3576 - 4100 (+)
Gene ID: HRGMv2_2451_32_3
Type: TF
Location: 4296 - 4775 (+)
Gene ID: HRGMv2_2451_32_4
Type: TC
Location: 4809 - 6575 (+)
Gene ID: HRGMv2_2451_32_5
Type: TC
Location: 6560 - 8440 (+)
Gene ID: HRGMv2_2451_32_6
Type: pfam
Location: 8517 - 9701 (-)
Gene ID: HRGMv2_2451_32_7
Type:
Location: 9955 - 10143 (-)
Gene ID: HRGMv2_2451_32_8
Type: CAZyme
Location: 10626 - 15350 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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