Cluster: HRGMv2_2451_CGC26
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2451
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2451_25 | HRGMv2_2451_25_18 | 17332 | 19101 | - | 2.A.58.2.2 |
| TF | HRGMv2_2451_25 | HRGMv2_2451_25_19 | 19393 | 19848 | + | MarR |
| pfam | HRGMv2_2451_25 | HRGMv2_2451_25_20 | 19952 | 21715 | + | DUF885 |
| CAZyme | HRGMv2_2451_25 | HRGMv2_2451_25_21 | 21874 | 23436 | + | GH5_4 |
Gene ID: HRGMv2_2451_25_18
Type: TC
Location: 17332 - 19101 (-)
Type: TC
Location: 17332 - 19101 (-)
Gene ID: HRGMv2_2451_25_19
Type: TF
Location: 19393 - 19848 (+)
Type: TF
Location: 19393 - 19848 (+)
Gene ID: HRGMv2_2451_25_20
Type: pfam
Location: 19952 - 21715 (+)
Type: pfam
Location: 19952 - 21715 (+)
Gene ID: HRGMv2_2451_25_21
Type: CAZyme
Location: 21874 - 23436 (+)
Type: CAZyme
Location: 21874 - 23436 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.