Cluster: HRGMv2_2451_CGC25
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2451
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2451_22 | HRGMv2_2451_22_3 | 2713 | 4494 | - | 1.B.52.2.1 |
| pfam | HRGMv2_2451_22 | HRGMv2_2451_22_4 | 4818 | 6152 | + | ELFV_dehydrog | ELFV_dehydrog_N |
| pfam | HRGMv2_2451_22 | HRGMv2_2451_22_5 | 6490 | 8586 | + | Sulfatase |
| CAZyme | HRGMv2_2451_22 | HRGMv2_2451_22_6 | 8726 | 10579 | + | GH25 |
| NULL(UNKNOWN) | HRGMv2_2451_22 | HRGMv2_2451_22_7 | 10644 | 11039 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_2451_22 | HRGMv2_2451_22_8 | 11219 | 13750 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2451_22 | HRGMv2_2451_22_9 | 14188 | 19368 | + | GH5_1 | GH9 |
Gene ID: HRGMv2_2451_22_3
Type: TC
Location: 2713 - 4494 (-)
Type: TC
Location: 2713 - 4494 (-)
Gene ID: HRGMv2_2451_22_4
Type: pfam
Location: 4818 - 6152 (+)
Type: pfam
Location: 4818 - 6152 (+)
Gene ID: HRGMv2_2451_22_5
Type: pfam
Location: 6490 - 8586 (+)
Type: pfam
Location: 6490 - 8586 (+)
Gene ID: HRGMv2_2451_22_6
Type: CAZyme
Location: 8726 - 10579 (+)
Type: CAZyme
Location: 8726 - 10579 (+)
Gene ID: HRGMv2_2451_22_7
Type:
Location: 10644 - 11039 (+)
Type:
Location: 10644 - 11039 (+)
Gene ID: HRGMv2_2451_22_8
Type:
Location: 11219 - 13750 (+)
Type:
Location: 11219 - 13750 (+)
Gene ID: HRGMv2_2451_22_9
Type: CAZyme
Location: 14188 - 19368 (+)
Type: CAZyme
Location: 14188 - 19368 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.