Cluster: HRGMv2_2451_CGC23
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2451
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2451_19 | HRGMv2_2451_19_41 | 40586 | 41791 | + | GT1 |
| pfam | HRGMv2_2451_19 | HRGMv2_2451_19_42 | 41827 | 43164 | - | Abhydrolase_1 | DUF676 |
| pfam | HRGMv2_2451_19 | HRGMv2_2451_19_43 | 43277 | 43897 | - | ABC2_membrane_5 |
| TC | HRGMv2_2451_19 | HRGMv2_2451_19_44 | 43899 | 44744 | - | 3.A.1.149.1 |
| TF | HRGMv2_2451_19 | HRGMv2_2451_19_45 | 44741 | 45121 | - | GntR |
| TC | HRGMv2_2451_19 | HRGMv2_2451_19_46 | 45286 | 47340 | - | 9.B.34.1.3 |
Gene ID: HRGMv2_2451_19_41
Type: CAZyme
Location: 40586 - 41791 (+)
Type: CAZyme
Location: 40586 - 41791 (+)
Gene ID: HRGMv2_2451_19_42
Type: pfam
Location: 41827 - 43164 (-)
Type: pfam
Location: 41827 - 43164 (-)
Gene ID: HRGMv2_2451_19_43
Type: pfam
Location: 43277 - 43897 (-)
Type: pfam
Location: 43277 - 43897 (-)
Gene ID: HRGMv2_2451_19_44
Type: TC
Location: 43899 - 44744 (-)
Type: TC
Location: 43899 - 44744 (-)
Gene ID: HRGMv2_2451_19_45
Type: TF
Location: 44741 - 45121 (-)
Type: TF
Location: 44741 - 45121 (-)
Gene ID: HRGMv2_2451_19_46
Type: TC
Location: 45286 - 47340 (-)
Type: TC
Location: 45286 - 47340 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.