Cluster: HRGMv2_2451_CGC20
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2451
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2451_16 | HRGMv2_2451_16_16 | 18588 | 21632 | + | 9.B.74.1.4 |
| pfam | HRGMv2_2451_16 | HRGMv2_2451_16_17 | 21684 | 22256 | + | Mntp |
| TC | HRGMv2_2451_16 | HRGMv2_2451_16_18 | 22425 | 24515 | + | 1.B.52.2.2 |
| CAZyme | HRGMv2_2451_16 | HRGMv2_2451_16_19 | 25181 | 28702 | + | GH5_1 |
Gene ID: HRGMv2_2451_16_16
Type: TC
Location: 18588 - 21632 (+)
Type: TC
Location: 18588 - 21632 (+)
Gene ID: HRGMv2_2451_16_17
Type: pfam
Location: 21684 - 22256 (+)
Type: pfam
Location: 21684 - 22256 (+)
Gene ID: HRGMv2_2451_16_18
Type: TC
Location: 22425 - 24515 (+)
Type: TC
Location: 22425 - 24515 (+)
Gene ID: HRGMv2_2451_16_19
Type: CAZyme
Location: 25181 - 28702 (+)
Type: CAZyme
Location: 25181 - 28702 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.