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Cluster: HRGMv2_2451_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2451_10 HRGMv2_2451_10_55 55564 56586 + 3.A.1.6.1
TC HRGMv2_2451_10 HRGMv2_2451_10_56 56637 57488 + 3.A.1.6.1
TC HRGMv2_2451_10 HRGMv2_2451_10_57 57488 58306 + 3.A.1.6.1
TC HRGMv2_2451_10 HRGMv2_2451_10_58 58309 59370 + 3.A.1.6.3
pfam HRGMv2_2451_10 HRGMv2_2451_10_59 59494 60312 - TraX
CAZyme HRGMv2_2451_10 HRGMv2_2451_10_60 60343 61221 - GT14
TC HRGMv2_2451_10 HRGMv2_2451_10_61 61381 64473 - 9.B.34.1.2
TC HRGMv2_2451_10 HRGMv2_2451_10_62 64733 65644 + 1.A.35.3.2
CAZyme HRGMv2_2451_10 HRGMv2_2451_10_63 65721 67841 + GH36
TC HRGMv2_2451_10 HRGMv2_2451_10_64 67909 69336 - 2.A.25.1.3
Gene ID: HRGMv2_2451_10_55
Type: TC
Location: 55564 - 56586 (+)
Gene ID: HRGMv2_2451_10_56
Type: TC
Location: 56637 - 57488 (+)
Gene ID: HRGMv2_2451_10_57
Type: TC
Location: 57488 - 58306 (+)
Gene ID: HRGMv2_2451_10_58
Type: TC
Location: 58309 - 59370 (+)
Gene ID: HRGMv2_2451_10_59
Type: pfam
Location: 59494 - 60312 (-)
Gene ID: HRGMv2_2451_10_60
Type: CAZyme
Location: 60343 - 61221 (-)
Gene ID: HRGMv2_2451_10_61
Type: TC
Location: 61381 - 64473 (-)
Gene ID: HRGMv2_2451_10_62
Type: TC
Location: 64733 - 65644 (+)
Gene ID: HRGMv2_2451_10_63
Type: CAZyme
Location: 65721 - 67841 (+)
Gene ID: HRGMv2_2451_10_64
Type: TC
Location: 67909 - 69336 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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