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Cluster: HRGMv2_2446_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2446_9 HRGMv2_2446_9_40 50071 51306 + 3.A.1.1.2
TC HRGMv2_2446_9 HRGMv2_2446_9_41 51323 52702 + 3.A.1.1.27
TC HRGMv2_2446_9 HRGMv2_2446_9_42 52705 53577 + 3.A.1.1.27
CAZyme HRGMv2_2446_9 HRGMv2_2446_9_43 53726 55798 + GH13_14
CAZyme HRGMv2_2446_9 HRGMv2_2446_9_44 55795 57804 + GH133
CAZyme HRGMv2_2446_9 HRGMv2_2446_9_45 57922 59685 + CBM34 | GH13_20
CAZyme HRGMv2_2446_9 HRGMv2_2446_9_46 59780 61417 + GH13_31
Gene ID: HRGMv2_2446_9_40
Type: TC
Location: 50071 - 51306 (+)
Gene ID: HRGMv2_2446_9_41
Type: TC
Location: 51323 - 52702 (+)
Gene ID: HRGMv2_2446_9_42
Type: TC
Location: 52705 - 53577 (+)
Gene ID: HRGMv2_2446_9_43
Type: CAZyme
Location: 53726 - 55798 (+)
Gene ID: HRGMv2_2446_9_44
Type: CAZyme
Location: 55795 - 57804 (+)
Gene ID: HRGMv2_2446_9_45
Type: CAZyme
Location: 57922 - 59685 (+)
Gene ID: HRGMv2_2446_9_46
Type: CAZyme
Location: 59780 - 61417 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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